Radish Marker Database

Arabidopsis genome (TAIR10) list : chr1

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 788


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS2127 chr1 4799918 7e-88
RSS2141 chr1 29916878 8e-68
RSS2143 chr1 6094087 6e-41
RSS2151 chr1 21516071 3e-41
RSS2155 chr1 9030492 4e-46
RSS2157 chr1 4367493 6e-29 LG7 17.1
RSS2161 chr1 20668505 2e-39
RSS2168 chr1 30335277 4e-34 LG6 12.3
RSS2181 chr1 25694758 2e-39
RSS2183 chr1 28241666 1e-79
RSS2187 chr1 29391909 7e-90
RSS2196 chr1 19133305 9e-30 LG7 84.2
RSS2197 chr1 9994606 1e-104
RSS2206 chr1 7177425 1e-32
RSS2214 chr1 6773623 3e-26
RSS2224 chr1 11875248 4e-50
RSS2226 chr1 3323145 8e-51
RSS2236 chr1 9297973 1e-81
RSS2245 chr1 2077313 1e-46 LG4 41.9
RSS2247 chr1 24007501 5e-73
RSS2251 chr1 4090568 1e-89
RSS2255 chr1 6712431 2e-78
RSS2260 chr1 27541212 3e-47
RSS2262 chr1 6991430 1e-105
RSS2263 chr1 19119297 1e-41 LG3 140.7
RSS2265 chr1 5917144 1e-47
RSS2286 chr1 1315038 2e-71 LG7 13.3
RSS2288 chr1 9214564 3e-25
RSS2290 chr1 11663590 1e-78 LG3 58.8
RSS2295 chr1 2341782 1e-28
RSS2297 chr1 22836254 2e-32
RSS2301 chr1 22717504 8e-29
RSS2303 chr1 20440705 1e-102
RSS2305 chr1 25211880 2e-59
RSS2313 chr1 30404042 3e-91
RSS2325 chr1 30083151 3e-30
RSS2328 chr1 17975976 6e-33
RSS2329 chr1 9851476 1e-80
RSS2333 chr1 24696499 7e-47
RSS2344 chr1 5305041 1e-64
RSS2349 chr1 4084596 1e-25
RSS2355 chr1 1911229 1e-61
RSS2372 chr1 19295026 4e-44
RSS2375 chr1 12671457 5e-53
RSS2377 chr1 19330982 6e-65
RSS2378 chr1 5399565 1e-95 LG7 19.6
RSS2382 chr1 29838734 5e-94
RSS2383 chr1 20102211 1e-22
RSS2384 chr1 23231038 1e-101
RSS2385 chr1 22201576 2e-83
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 788

MarkerDB | Raphanus sativus