Radish Marker Database

Arabidopsis genome (TAIR10) list : chr1

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 788


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS1838 chr1 29576557 2e-88
RSS1841 chr1 30041871 6e-60
RSS1843 chr1 3677136 1e-65 LG7 14.3
RSS1846 chr1 5857297 1e-65
RSS1860 chr1 20184497 2e-69
RSS1862 chr1 20939807 1e-77
RSS1865 chr1 26349257 9e-96
RSS1867 chr1 5515216 1e-48
RSS1890 chr1 11929163 6e-32
RSS1893 chr1 10181990 1e-109
RSS1896 chr1 28697943 6e-60 LG1 64.2
RSS1897 chr1 11538970 1e-110
RSS1921 chr1 22977252 1e-29
RSS1922 chr1 20269197 2e-49
RSS1936 chr1 27640270 8e-79
RSS1942 chr1 27148986 1e-33
RSS1945 chr1 8082585 9e-41 LG9 41.0
RSS1946 chr1 10619008 8e-40
RSS1948 chr1 30195026 1e-114
RSS1950 chr1 7652228 6e-41
RSS1951 chr1 16267465 1e-117
RSS1962 chr1 8645986 1e-110
RSS1964 chr1 2750487 1e-35
RSS1966 chr1 25391817 6e-95
RSS1973 chr1 307042 7e-49 LG3 64.1
RSS1978 chr1 3514227 9e-98
RSS1990 chr1 6856845 3e-87
RSS1993 chr1 28242176 2e-84
RSS2014 chr1 9071208 3e-87
RSS2021 chr1 6459646 1e-82
RSS2023 chr1 196298 3e-26
RSS2024 chr1 25154929 1e-54
RSS2026 chr1 8399635 1e-102
RSS2036 chr1 30157115 2e-28
RSS2037 chr1 1769193 5e-77 LG9 69.2
RSS2038 chr1 6764573 9e-24
RSS2045 chr1 10268822 9e-61 LG9 26.4
RSS2047 chr1 4891460 2e-75 LG9 56.5
RSS2049 chr1 25391817 1e-116
RSS2063 chr1 12207851 1e-86
RSS2079 chr1 24596790 2e-30 LG4 64.2
RSS2085 chr1 1836972 1e-61
RSS2090 chr1 2012586 1e-93 LG3 69.2
RSS2091 chr1 4245192 1e-62
RSS2094 chr1 7791660 2e-55 LG9 42.9
RSS2097 chr1 7164722 4e-55
RSS2104 chr1 19645919 4e-57
RSS2115 chr1 573135 1e-128
RSS2117 chr1 16941309 3e-47
RSS2120 chr1 26122893 8e-39
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 788

MarkerDB | Raphanus sativus