Radish Marker Database

Arabidopsis genome (TAIR10) list : chr1

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 788


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS0500 chr1 4837022 4e-86
RSS0504 chr1 19510060 1e-38
RSS0506 chr1 6247085 1e-69
RSS0512 chr1 6562198 2e-55
RSS0518 chr1 22800993 1e-103 LG2 27.9
RSS0519 chr1 11569408 1e-82
RSS0520 chr1 7569528 2e-50
RSS0528 chr1 27108681 3e-43
RSS0532 chr1 24631530 3e-29
RSS0535 chr1 2589953 1e-102
RSS0536 chr1 26420177 1e-76
RSS0544 chr1 19892150 6e-71
RSS0547 chr1 10629749 7e-51
RSS0548 chr1 18359970 1e-45
RSS0564 chr1 28953365 3e-66
RSS0577 chr1 28298397 1e-41 LG1 71.7
RSS0578 chr1 7874728 1e-97
RSS0579 chr1 23151891 1e-103
RSS0580 chr1 30020293 1e-102
RSS0587 chr1 26041929 1e-101
RSS0589 chr1 30422477 3e-47
RSS0600 chr1 9660627 6e-75
RSS0609 chr1 19643843 3e-79 LG3 107.6
RSS0627 chr1 4968659 1e-68
RSS0630 chr1 30290987 1e-124
RSS0638 chr1 27403631 2e-64
RSS0639 chr1 24029553 1e-121
RSS0662 chr1 21030242 1e-100 LG2 10.9
RSS0662_a chr1 21030242 1e-100 LG3 143.9
RSS0662_b chr1 21030242 1e-100 LG3 142.4
RSS0675 chr1 28535105 1e-95 LG1 70.6
RSS0677 chr1 1217281 2e-23
RSS0679 chr1 10808307 1e-49 LG9 24.9
RSS0686 chr1 4609588 3e-94
RSS0691 chr1 25720260 1e-112
RSS0697 chr1 5228884 8e-71
RSS0705 chr1 8420840 3e-78
RSS0708 chr1 29802349 1e-64
RSS0710 chr1 28297720 4e-26
RSS0714 chr1 19844910 8e-88
RSS0716 chr1 11115928 1e-110
RSS0723 chr1 21513753 1e-52
RSS0726 chr1 7088903 3e-39
RSS0730 chr1 3202708 2e-82
RSS0734 chr1 2109171 5e-55
RSS0740 chr1 6459481 1e-53
RSS0745 chr1 28452022 1e-142
RSS0747 chr1 7454988 3e-24
RSS0753 chr1 8385519 2e-53
RSS0755 chr1 1829307 1e-54 LG9 68.4
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 788

MarkerDB | Raphanus sativus