Radish Marker Database

Arabidopsis genome (TAIR10) list : chr1

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 788


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS1921 chr1 22977252 1e-29
RSS0579 chr1 23151891 1e-103
RSS0357 chr1 23151906 6e-86
RSS2384 chr1 23231038 1e-101
RSS0117 chr1 23319736 2e-57
RSS0452 chr1 23392573 4e-78
RSS3134 chr1 23410677 4e-73
RSS3187 chr1 23473641 2e-69
RSS1629 chr1 23486840 5e-66
RSS2983 chr1 23556192 2e-57
RSS0045 chr1 23636970 3e-59
RSS1222 chr1 23742316 3e-47
RSS1710 chr1 23795180 5e-46 LG4 57.6
RSS3945 chr1 23881702 4e-85
RSS2247 chr1 24007501 5e-73
RSS0639 chr1 24029553 1e-121
RSS1181 chr1 24047309 4e-77
RSS0883 chr1 24058035 9e-64
RSS0087 chr1 24098494 5e-45
RSS1214 chr1 24148251 2e-36
RSS0133 chr1 24246230 1e-77
RSS0190 chr1 24261097 8e-82
RSS2642 chr1 24297784 2e-48
RSS2611 chr1 24400293 7e-79
RSS3883 chr1 24440713 3e-30
RSS1277 chr1 24440713 1e-46
RSS2711 chr1 24442678 2e-59
RSS2079 chr1 24596790 2e-30 LG4 64.2
RSS0291 chr1 24610208 3e-31 LG1 56.2
RSS1163 chr1 24620653 2e-69
RSS0532 chr1 24631530 3e-29
RSS3510 chr1 24632931 1e-133
RSS2333 chr1 24696499 7e-47
RSS3624 chr1 24771305 1e-70
RSS1177 chr1 24853198 2e-35 LG6 20.8
RSS2473 chr1 24937147 2e-23
RSS1798 chr1 24951359 3e-96 LG5 24.2
RSS2947 chr1 25029344 3e-89
RSS1416 chr1 25029548 1e-50
RSS0410 chr1 25127838 5e-36
RSS2958 chr1 25127862 5e-77 LG5 21.2
RSS2801 chr1 25133831 1e-103
RSS2869 chr1 25151978 7e-30
RSS2024 chr1 25154929 1e-54
RSS1498 chr1 25211361 5e-66
RSS2305 chr1 25211880 2e-59
RSS0825 chr1 25286048 3e-62
RSS3057 chr1 25366924 1e-116
RSS1510 chr1 25391817 1e-113
RSS1966 chr1 25391817 6e-95
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 788

MarkerDB | Raphanus sativus