Radish Marker Database

Arabidopsis genome (TAIR10) list : chr1

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 788


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)
Evalue GHRI
Name Position* Linkage Position
RSS1044 chr1 48852 2e-69
RSS3133 chr1 48852 1e-100
RSS3264 chr1 157186 5e-69
RSS2023 chr1 196298 3e-26
RSS1671 chr1 231655 1e-66
RSS1973 chr1 307042 7e-49 LG3 64.1
RSS1138 chr1 308991 5e-71
RSS0070 chr1 346286 4e-62
RSS3299 chr1 443456 5e-61
RSS1110 chr1 457208 3e-84
RSS1707 chr1 491663 2e-37
RSS2115 chr1 573135 1e-128
RSS2992 chr1 574722 1e-40 LG3 65.2
RSS2605 chr1 620842 4e-52
RSS1309 chr1 702470 1e-43 LG9 72.1
RSS2579 chr1 704274 4e-49
RSS1350 chr1 756226 2e-55
RSS1255 chr1 879321 4e-23
RSS2487 chr1 882606 2e-24 LG9 71.4
RSS1215 chr1 898967 2e-77
RSS1247 chr1 898967 6e-79
RSS0198 chr1 901483 2e-63 LG8 10.0
RSS3693 chr1 942820 2e-57
RSS3293 chr1 1142112 3e-75
RSS3879 chr1 1149261 2e-22
RSS0279 chr1 1149999 3e-72
RSS3519 chr1 1150543 1e-30
RSS3203 chr1 1163704 7e-24
RSS3723 chr1 1168658 1e-116 LG3 67.0
RSS0677 chr1 1217281 2e-23
RSS3223 chr1 1222987 8e-71
RSS2286 chr1 1315038 2e-71 LG7 13.3
RSS2436 chr1 1368688 3e-66
RSS2710 chr1 1477920 2e-52
RSS2979 chr1 1493242 2e-39
RSS2655 chr1 1529809 1e-109
RSS3852 chr1 1530894 6e-77
RSS3622 chr1 1531955 1e-46
RSS2470 chr1 1534179 2e-30
RSS2926 chr1 1610288 1e-101
RSS2812 chr1 1640456 5e-33
RSS0908 chr1 1680112 8e-72
RSS1125 chr1 1718846 1e-26
RSS0462 chr1 1746203 3e-54
RSS2037 chr1 1769193 5e-77 LG9 69.2
RSS2746 chr1 1808743 2e-64
RSS0755 chr1 1829307 1e-54 LG9 68.4
RSS0394 chr1 1836918 3e-60
RSS2085 chr1 1836972 1e-61
RSS2355 chr1 1911229 1e-61
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 788


MarkerDB | Raphanus sativus