Radish Marker Database

B. rapa genome (v1.2) list : A10

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 272


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2979 A10 2094474 2e-64
RSS2987 A10 11078329 5e-48
RSS3024 A10 17003194 1e-67
RSS3054 A10 17104198 3e-25
RSS3132 A10 8810577 1e-107
RSS3133 A10 4493744 1e-113
RSS3159 A10 11599091 3e-43
RSS3163 A10 1189604 2e-86
RSS3193 A10 8478663 2e-24
RSS3214 A10 12009933 2e-73
RSS3219 A10 9909309 1e-99
RSS3223 A10 2487945 1e-85
RSS3237 A10 8243398 2e-63
RSS3264 A10 4605690 2e-71
RSS3267 A10 13220778 1e-05
RSS3269 A10 8243398 5e-71
RSS3299 A10 4342856 2e-94
RSS3319 A10 13113704 9e-17
RSS3334 A10 16291898 4e-52
RSS3343 A10 1446064 9e-10
RSS3357 A10 14722124 3e-78
RSS3387 A10 5118641 8e-22
RSS3424 A10 10126302 3e-47
RSS3427 A10 14878919 7e-06
RSS3428 A10 16925582 5e-78
RSS3470 A10 12379273 1e-108
RSS3473 A10 8530202 4e-05
RSS3493 A10 9975497 1e-76
RSS3507 A10 1257680 1e-76
RSS3523 A10 14234503 1e-87
RSS3524 A10 15609075 1e-129
RSS3554 A10 15463384 3e-23
RSS3606 A10 14163780 3e-89
RSS3632 A10 7399736 4e-92
RSS3636 A10 15962161 1e-114
RSS3639 A10 5348035 3e-34
RSS3640 A10 16451388 3e-27 LG1 89.8
RSS3652 A10 15636737 1e-105
RSS3664 A10 13682470 1e-100
RSS3691 A10 15778474 4e-93
RSS3693 A10 2817137 2e-77
RSS3719 A10 9912483 3e-99
RSS3723 A10 2560877 1e-120 LG3 67.0
RSS3724 A10 14108367 1e-135
RSS3730 A10 15205628 6e-88
RSS3732 A10 13565119 3e-95
RSS3740 A10 6533937 1e-42
RSS3743 A10 16042024 2e-75
RSS3744 A10 15108592 1e-57
RSS3745 A10 7742399 1e-102
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 272

MarkerDB | Raphanus sativus