Radish Marker Database

B. rapa genome (v1.2) list : A10

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 272


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS1484 A10 950153 1e-117
RSS1488 A10 17429060 3e-70
RSS1514 A10 10614127 1e-120
RSS1523 A10 14404749 2e-50 LG1 120.8
RSS1552 A10 13289076 1e-113
RSS1559 A10 1321249 1e-108
RSS1564 A10 1275843 1e-16
RSS1573 A10 4495523 9e-53
RSS1576 A10 16246550 2e-96
RSS1592 A10 5634749 5e-58 LG6 54.5
RSS1613 A10 16451845 4e-88
RSS1621 A10 9252864 1e-100
RSS1622 A10 11035687 1e-57
RSS1634 A10 7633596 1e-65
RSS1641 A10 4495523 2e-53
RSS1671 A10 4701355 5e-75
RSS1707 A10 4256679 8e-45
RSS1738 A10 7256364 3e-08
RSS1750 A10 13631645 2e-98
RSS1758 A10 10715243 8e-87 LG1 107.4
RSS1758_a A10 10715243 8e-87 LG5 64.6
RSS1786 A10 17508057 2e-61 LG1 109.2
RSS1790 A10 7874440 2e-29 LG6 42.7
RSS1797 A10 13448298 4e-06
RSS1807 A10 848358 7e-27
RSS1822 A10 17229531 1e-83
RSS1827 A10 13989013 1e-101
RSS1834 A10 17217364 8e-89
RSS1849 A10 11390220 1e-143
RSS1870 A10 8515153 7e-96 LG6 39.8
RSS1883 A10 17571879 4e-08
RSS1904 A10 10735828 1e-83
RSS1912 A10 649082 9e-19 LG9 14.7
RSS1920 A10 16364811 5e-96
RSS1958 A10 7349440 1e-84
RSS1999 A10 15276128 3e-67
RSS2011 A10 11579898 4e-10
RSS2028 A10 14062496 7e-57
RSS2032 A10 9195917 3e-40
RSS2076 A10 5244439 3e-72 LG3 39.7
RSS2112 A10 6716590 1e-66 LG6 52.1
RSS2118 A10 17467893 3e-12
RSS2171 A10 16367995 1e-49
RSS2180 A10 9975395 7e-99
RSS2182 A10 16702208 6e-57
RSS2237 A10 15845012 5e-53
RSS2293 A10 10364139 1e-122
RSS2308 A10 10525359 5e-40 LG5 55.6
RSS2331 A10 16436287 3e-14
RSS2336 A10 9310352 3e-79
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 272

MarkerDB | Raphanus sativus