Radish Marker Database

B. rapa genome (v1.2) list : A10

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 272


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS1738 A10 7256364 3e-08
RSS3779 A10 7262169 2e-62
RSS0123 A10 7313237 4e-95
RSS1958 A10 7349440 1e-84
RSS3632 A10 7399736 4e-92
RSS0672 A10 7503106 2e-92
RSS0572 A10 7601337 1e-114
RSS1634 A10 7633596 1e-65
RSS3745 A10 7742399 1e-102
RSS0879 A10 7861411 2e-77
RSS0819 A10 8229658 1e-94
RSS3237 A10 8243398 2e-63
RSS3269 A10 8243398 5e-71
RSS2978 A10 8320294 1e-117
RSS3774 A10 8364480 8e-77
RSS3193 A10 8478663 2e-24
RSS3473 A10 8530202 4e-05
RSS2389 A10 8578373 8e-57
RSS2864 A10 8658109 1e-111
RSS3132 A10 8810577 1e-107
RSS2838 A10 8991885 4e-10
RSS2032 A10 9195917 3e-40
RSS1621 A10 9252864 1e-100
RSS2336 A10 9310352 3e-79
RSS0783 A10 9382556 1e-66
RSS0969 A10 9455099 2e-25
RSS0796 A10 9901104 1e-54
RSS3219 A10 9909309 1e-99
RSS3719 A10 9912483 3e-99
RSS0526 A10 9912820 3e-41
RSS0324 A10 9926212 7e-42
RSS0172 A10 9926819 1e-100
RSS2876 A10 9926819 3e-80
RSS0624 A10 9942452 8e-72
RSS2351 A10 9975082 1e-61
RSS2180 A10 9975395 7e-99
RSS3493 A10 9975497 1e-76
RSS3424 A10 10126302 3e-47
RSS2928 A10 10226526 7e-68
RSS3795 A10 10232265 1e-113
RSS0245 A10 10316949 1e-119
RSS2293 A10 10364139 1e-122
RSS4025 A10 10364284 0.012
RSS3793 A10 10504013 1e-41
RSS1514 A10 10614127 1e-120
RSS1904 A10 10735828 1e-83
RSS1299 A10 10844391 2e-89
RSS1622 A10 11035687 1e-57
RSS1090 A10 11075296 1e-95
RSS2987 A10 11078329 5e-48
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 272


MarkerDB | Raphanus sativus