Radish Marker Database

B. rapa genome (v1.2) list : A10

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 272


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS0969 A10 9455099 2e-25
RSS0977 A10 9770124 1e-124 LG8 64.4
RSS0796 A10 9901104 1e-54
RSS3219 A10 9909309 1e-99
RSS3719 A10 9912483 3e-99
RSS0526 A10 9912820 3e-41
RSS0324 A10 9926212 7e-42
RSS0172 A10 9926819 1e-100
RSS2876 A10 9926819 3e-80
RSS0624 A10 9942452 8e-72
RSS2351 A10 9975082 1e-61
RSS2180 A10 9975395 7e-99
RSS3493 A10 9975497 1e-76
RSS3424 A10 10126302 3e-47
RSS2928 A10 10226526 7e-68
RSS3795 A10 10232265 1e-113
RSS0245 A10 10316949 1e-119
RSS2359 A10 10324162 9e-17 LG8 67.0
RSS2293 A10 10364139 1e-122
RSS4025 A10 10364284 0.012
RSS3793 A10 10504013 1e-41
RSS2308 A10 10525359 5e-40 LG5 55.6
RSS1514 A10 10614127 1e-120
RSS1758 A10 10715243 8e-87 LG1 107.4
RSS1758_a A10 10715243 8e-87 LG5 64.6
RSS1273 A10 10734044 1e-106 LG1 107.7
RSS1904 A10 10735828 1e-83
RSS2692 A10 10790171 6e-97 LG1 107.0
RSS1299 A10 10844391 2e-89
RSS1622 A10 11035687 1e-57
RSS1012 A10 11064974 1e-92 LG1 104.8
RSS1090 A10 11075296 1e-95
RSS2987 A10 11078329 5e-48
RSS0433 A10 11173246 4e-87
RSS2945 A10 11294612 1e-107 LG1 104.7
RSS0287 A10 11309066 6e-56
RSS1849 A10 11390220 1e-143
RSS4022 A10 11416981 0.002
RSS0575 A10 11498964 7e-92 LG3 116.2
RSS0173 A10 11498964 2e-80 LG3 116.3
RSS2011 A10 11579898 4e-10
RSS3159 A10 11599091 3e-43
RSS1336 A10 11599106 7e-73 LG3 116.3
RSS3966 A10 11735378 1e-107
RSS0965 A10 11888861 1e-113
RSS0446 A10 11985231 8e-42
RSS3214 A10 12009933 2e-73
RSS0079 A10 12055099 1e-117
RSS2665 A10 12123404 1e-119 LG3 115.7
RSS0757 A10 12299205 9e-65
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 272

MarkerDB | Raphanus sativus