Radish Marker Database

B. rapa genome (v1.2) list : A10

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 272


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS0344 A10 489109 1e-128
RSS1912 A10 649082 9e-19 LG9 14.7
RSS1807 A10 848358 7e-27
RSS1484 A10 950153 1e-117
RSS0097 A10 951095 1e-100
RSS3773 A10 998642 3e-72
RSS3163 A10 1189604 2e-86
RSS2619 A10 1190640 1e-101
RSS0734 A10 1194045 4e-65
RSS3507 A10 1257680 1e-76
RSS0444 A10 1273012 2e-72
RSS1376 A10 1274732 1e-59
RSS1564 A10 1275843 1e-16
RSS1559 A10 1321249 1e-108
RSS3343 A10 1446064 9e-10
RSS0755 A10 1588823 2e-73 LG9 68.4
RSS0462 A10 1653135 1e-114
RSS2926 A10 1829312 1e-101
RSS2655 A10 2052935 1e-113
RSS2979 A10 2094474 2e-64
RSS3856 A10 2220784 1e-10
RSS0976 A10 2237319 1e-105
RSS2436 A10 2294067 2e-71
RSS3223 A10 2487945 1e-85
RSS3723 A10 2560877 1e-120 LG3 67.0
RSS0279 A10 2583603 1e-111
RSS3693 A10 2817137 2e-77
RSS2716 A10 3151327 1e-132
RSS0116 A10 3296273 2e-99
RSS1215 A10 3801832 1e-101
RSS1247 A10 3801832 4e-96
RSS2487 A10 3819487 3e-58 LG9 71.4
RSS1255 A10 3822421 1e-24
RSS0107 A10 4038520 2e-57
RSS2579 A10 4039568 3e-76
RSS1309 A10 4041465 3e-49 LG9 72.1
RSS2605 A10 4121258 1e-100
RSS1707 A10 4256679 8e-45
RSS3299 A10 4342856 2e-94
RSS3133 A10 4493744 1e-113
RSS1573 A10 4495523 9e-53
RSS1641 A10 4495523 2e-53
RSS0264 A10 4506259 5e-52
RSS3264 A10 4605690 2e-71
RSS1671 A10 4701355 5e-75
RSS3387 A10 5118641 8e-22
RSS2076 A10 5244439 3e-72 LG3 39.7
RSS3760 A10 5265097 1e-113
RSS2916 A10 5299702 3e-50 LG6 55.1
RSS3639 A10 5348035 3e-34
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 272


MarkerDB | Raphanus sativus