Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS1536 A09 29780556 6e-88
RSS1968 A09 29784474 4e-73
RSS1171 A09 29850465 2e-46
RSS0560 A09 29885091 1e-104
RSS2041 A09 29972101 1e-32
RSS2509 A09 30159284 9e-18
RSS3249 A09 30166153 1e-122
RSS0687 A09 30180768 1e-123
RSS0623 A09 30265333 2e-63
RSS2106 A09 30366511 9e-33
RSS1313 A09 30406912 8e-86
RSS1596 A09 30407843 2e-62
RSS1503 A09 30571369 2e-99
RSS0248 A09 30601051 6e-50
RSS1686 A09 30662009 1e-97
RSS1906 A09 30667845 6e-20
RSS1320 A09 30742146 3e-67
RSS0653 A09 30771447 5e-68
RSS0878 A09 30864072 6e-56
RSS1165 A09 31065840 4e-48
RSS1230 A09 31148388 1e-123
RSS3140 A09 31215619 1e-133
RSS1667 A09 31281342 1e-117
RSS0951 A09 31310823 3e-69
RSS0240 A09 31335354 1e-118
RSS2438 A09 31350024 4e-30
RSS2518 A09 31373187 2e-92
RSS3650 A09 31375628 3e-85
RSS1556 A09 31382652 9e-66
RSS3670 A09 31388294 0.19
RSS0286 A09 31475506 1e-104
RSS1392 A09 31478209 2e-87
RSS2221 A09 31566010 3e-56
RSS0285 A09 31572650 1e-120
RSS0157 A09 31607564 1e-114
RSS4013 A09 31646857 4e-85
RSS3865 A09 31679910 9e-69
RSS3112 A09 31722009 3e-86
RSS3782 A09 31800428 8e-68
RSS2884 A09 31801533 1e-112
RSS3457 A09 31851857 3e-64
RSS3679 A09 31852706 9e-90
RSS3441 A09 31885284 6e-61
RSS1917 A09 31896454 6e-83
RSS3889 A09 31898167 1e-53
RSS2356 A09 31980558 2e-46
RSS1414 A09 31986579 5e-34
RSS2192 A09 31998795 2e-66
RSS3982 A09 32030108 1e-108
RSS3767 A09 32037953 5e-52
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517


MarkerDB | Raphanus sativus