Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS2633 A09 28339514 1e-104
RSS2637 A09 622683 1e-129
RSS2654 A09 26035349 4e-51
RSS2673 A09 14522376 3e-16
RSS2683 A09 24529790 2e-45
RSS2687 A09 21816181 1e-16
RSS2698 A09 4506287 4e-22
RSS2724 A09 4116983 1e-87 LG2 34.1
RSS2727 A09 32146564 3e-98
RSS2738 A09 25334987 2e-72
RSS2742 A09 32392287 6e-41
RSS2753 A09 28490738 1e-39
RSS2759 A09 4578459 1e-121
RSS2782 A09 9037909 1e-117
RSS2790 A09 28214542 2e-69
RSS2812 A09 22780154 3e-33
RSS2831 A09 34949909 4e-96 LG3 73.4
RSS2843 A09 22602281 4e-58 LG9 26.4
RSS2850 A09 26332947 1e-100
RSS2863 A09 8254787 3e-64
RSS2872 A09 28214173 6e-68
RSS2875 A09 7844970 2e-08
RSS2881 A09 32547438 3e-48 LG2 65.1
RSS2884 A09 31801533 1e-112
RSS2893 A09 12710255 2e-82
RSS2927 A09 20180170 4e-87
RSS2954 A09 34981178 4e-77
RSS2959 A09 950243 8e-70
RSS2970 A09 26747172 5e-29 LG3 77.4
RSS2974 A09 29139094 7e-90 LG3 90.5
RSS2976 A09 32701170 4e-57
RSS2983 A09 6067505 2e-84
RSS2992 A09 36750052 2e-64 LG3 65.2
RSS2995 A09 28676809 3e-43
RSS3012 A09 15658964 1e-58
RSS3013 A09 27223639 1e-107
RSS3016 A09 25641684 1e-82
RSS3027 A09 1098965 4e-53
RSS3028 A09 28440277 1e-45
RSS3029 A09 15816108 4e-68
RSS3035 A09 28478930 3e-73
RSS3041 A09 13739057 8e-72 LG6 143.3
RSS3043 A09 35152100 6e-90 LG3 73.7
RSS3067 A09 4148882 7e-88
RSS3080 A09 25897220 1e-113
RSS3082 A09 32329487 1e-117 LG2 111.8
RSS3086 A09 21448200 4e-82 LG5 108.8
RSS3101 A09 27236770 6e-08
RSS3105 A09 11921918 8e-87
RSS3108 A09 3231883 8e-89
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517


MarkerDB | Raphanus sativus