Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS1910 A09 28598049 1e-38
RSS0162 A09 28668852 1e-110
RSS0992 A09 28668852 8e-67
RSS2995 A09 28676809 3e-43
RSS3416 A09 28794016 6e-62
RSS1099 A09 28796554 1e-66
RSS0301 A09 28871877 1e-112
RSS0154 A09 28885583 6e-59 LG3 87.6
RSS1025 A09 28890015 6e-64
RSS0583 A09 28890218 3e-86
RSS3874 A09 28916328 1e-100
RSS0524 A09 28925362 1e-103
RSS1508 A09 28928667 5e-84
RSS1331 A09 28988927 2e-65
RSS3683 A09 29068681 3e-95
RSS2974 A09 29139094 7e-90 LG3 90.5
RSS1311 A09 29167818 1e-108
RSS0574 A09 29177913 6e-72 LG3 90.5
RSS2541 A09 29305341 1e-103
RSS0181 A09 29309775 3e-85
RSS3322 A09 29381418 1e-114
RSS2188 A09 29493975 1e-82 LG3 91.4
RSS2317 A09 29494791 4e-91
RSS1195 A09 29583391 2e-50 LG3 91.8
RSS3712 A09 29743326 9e-41
RSS1536 A09 29780556 6e-88
RSS1968 A09 29784474 4e-73
RSS1171 A09 29850465 2e-46
RSS0560 A09 29885091 1e-104
RSS2041 A09 29972101 1e-32
RSS2509 A09 30159284 9e-18
RSS3249 A09 30166153 1e-122
RSS0687 A09 30180768 1e-123
RSS0623 A09 30265333 2e-63
RSS1955 A09 30319291 1e-73 LG3 97.3
RSS3250 A09 30338075 5e-87 LG3 98.1
RSS2106 A09 30366511 9e-33
RSS1313 A09 30406912 8e-86
RSS1596 A09 30407843 2e-62
RSS1503 A09 30571369 2e-99
RSS0248 A09 30601051 6e-50
RSS1686 A09 30662009 1e-97
RSS1537 A09 30663102 4e-58 LG4 1.3
RSS1906 A09 30667845 6e-20
RSS1320 A09 30742146 3e-67
RSS0653 A09 30771447 5e-68
RSS2310 A09 30780233 1e-57 LG3 100.0
RSS3234 A09 30796071 1e-105 LG4 52.5
RSS3864 A09 30858112 3e-57 LG2 96.4
RSS0878 A09 30864072 6e-56
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517


MarkerDB | Raphanus sativus