Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS1857 A09 1339540 1e-137
RSS1865 A09 35112079 1e-112
RSS1875 A09 25360175 3e-08
RSS1893 A09 22809973 1e-110
RSS1900 A09 17162963 1e-128
RSS1906 A09 30667845 6e-20
RSS1910 A09 28598049 1e-38
RSS1917 A09 31896454 6e-83
RSS1921 A09 17486273 4e-12
RSS1923 A09 1539646 2e-79
RSS1940 A09 20229241 1e-09
RSS1941 A09 35250171 5e-14
RSS1945 A09 24510348 5e-48 LG9 41.0
RSS1951 A09 10333424 1e-127
RSS1954 A09 14378436 2e-83 LG6 130.9
RSS1955 A09 30319291 1e-73 LG3 97.3
RSS1968 A09 29784474 4e-73
RSS1970 A09 3825606 1e-90
RSS1971 A09 2884912 1e-84 LG4 113.0
RSS1973 A09 37033484 4e-86 LG3 64.1
RSS1976 A09 27660490 1e-103
RSS1988 A09 27736687 1e-94
RSS1998 A09 4610380 1e-138 LG9 9.9
RSS2023 A09 881004 6e-30
RSS2026 A09 24009168 1e-107
RSS2029 A09 7447181 3e-91
RSS2031 A09 24576372 2e-44
RSS2033 A09 26942969 2e-40
RSS2041 A09 29972101 1e-32
RSS2043 A09 3360183 9e-96
RSS2045 A09 22643444 4e-85 LG9 26.4
RSS2051 A09 1032775 1e-109
RSS2056 A09 28048707 6e-61
RSS2063 A09 19460946 1e-111
RSS2089 A09 27059908 5e-63 LG3 78.6
RSS2090 A09 35971230 1e-97 LG3 69.2
RSS2093 A09 27729266 6e-51
RSS2106 A09 30366511 9e-33
RSS2113 A09 4310373 5e-07 LG6 151.4
RSS2115 A09 36751541 1e-138
RSS2126 A09 28318953 9e-46 LG4 4.0
RSS2128 A09 27312514 1e-109
RSS2145 A09 2700466 1e-120
RSS2151 A09 9596225 3e-62
RSS2175 A09 9165210 2e-45
RSS2177 A09 4118205 1e-88
RSS2185 A09 1569202 1e-114
RSS2188 A09 29493975 1e-82 LG3 91.4
RSS2192 A09 31998795 2e-66
RSS2199 A09 1611784 3e-41
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517

MarkerDB | Raphanus sativus