Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS0357 A09 7793894 7e-95
RSS0579 A09 7793912 1e-117
RSS2357 A09 7839491 8e-53
RSS2875 A09 7844970 2e-08
RSS3801 A09 8254751 3e-72
RSS2863 A09 8254787 3e-64
RSS3790 A09 8255258 1e-104
RSS1053 A09 8283682 2e-82
RSS2301 A09 8310685 5e-36
RSS0212 A09 8367473 1e-124
RSS1812 A09 8561981 2e-11
RSS3831 A09 8749663 1e-101
RSS0487 A09 8889869 5e-89
RSS2782 A09 9037909 1e-117
RSS0040 A09 9143348 1e-106
RSS2175 A09 9165210 2e-45
RSS3834 A09 9257893 1e-104
RSS2151 A09 9596225 3e-62
RSS0723 A09 9600970 2e-53
RSS3984 A09 9856452 1e-32
RSS1238 A09 10055837 1e-112
RSS3309 A09 10169725 3e-67
RSS1951 A09 10333424 1e-127
RSS1366 A09 10781826 1e-115
RSS3311 A09 10902874 2e-60
RSS0133 A09 11127109 6e-97
RSS2432 A09 11662982 5e-94
RSS1845 A09 11676409 6e-87
RSS1075 A09 11873197 2e-89
RSS3105 A09 11921918 8e-87
RSS3367 A09 11921981 1e-135
RSS1057 A09 12422315 8e-65
RSS0600 A09 12434510 1e-130
RSS3496 A09 12450487 8e-73
RSS0260 A09 12608965 9e-61
RSS0738 A09 12659951 1e-63
RSS0217 A09 12680853 3e-78
RSS2893 A09 12710255 2e-82
RSS2588 A09 13454342 1e-116
RSS1232 A09 13494186 1e-138
RSS0503 A09 13494639 5e-91
RSS1611 A09 13736245 6e-30
RSS0517 A09 14035295 3e-57
RSS0405 A09 14101814 3e-56
RSS1391 A09 14195088 1e-127
RSS0888 A09 14259559 6e-84
RSS1235 A09 14318586 8e-10
RSS1588 A09 14338166 9e-29
RSS2673 A09 14522376 3e-16
RSS3706 A09 14807720 5e-73
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517

MarkerDB | Raphanus sativus