Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS0670 A09 15493204 3e-08
RSS1499 A09 15511821 1e-85
RSS1841 A09 15511863 5e-76
RSS3012 A09 15658964 1e-58
RSS0800 A09 15678822 1e-97
RSS0537 A09 15728883 1e-116
RSS0983 A09 15750929 4e-84
RSS3308 A09 15765873 1e-14
RSS3775 A09 15796832 2e-59
RSS3029 A09 15816108 4e-68
RSS3287 A09 15824141 1e-19 LG6 140.1
RSS1035 A09 15897141 5e-58 LG6 138.9
RSS1211 A09 15911974 6e-69
RSS3142 A09 16094959 4e-88
RSS1133 A09 16620679 2e-68 LG6 141.6
RSS0927 A09 16846032 1e-111
RSS0785 A09 16846826 6e-83
RSS1219 A09 16983574 1e-101
RSS3419 A09 17133443 6e-49
RSS1900 A09 17162963 1e-128
RSS3786 A09 17166917 2e-88
RSS1708 A09 17410384 2e-70
RSS0346 A09 17459846 4e-82
RSS1921 A09 17486273 4e-12
RSS3452 A09 17698440 3e-25
RSS1130 A09 17706109 8e-71
RSS1322 A09 18095846 1e-104
RSS3466 A09 18841954 1e-110
RSS2552 A09 18921838 3e-99 LG9 15.4
RSS0004 A09 18993624 6e-20
RSS1517 A09 19335087 2e-34
RSS2063 A09 19460946 1e-111
RSS3522 A09 19582126 4e-79
RSS2224 A09 19867723 5e-61
RSS1699 A09 19943276 1e-89
RSS1649 A09 20046875 3e-78
RSS0375 A09 20066133 1e-33 LG4 9.3
RSS0416 A09 20133096 9e-74
RSS2927 A09 20180170 4e-87
RSS1940 A09 20229241 1e-09
RSS2478 A09 20348570 7e-92
RSS0032 A09 20410177 1e-108
RSS1682 A09 20420483 1e-112
RSS0232 A09 20421548 1e-124
RSS1290 A09 20721280 1e-121
RSS1516 A09 21089634 4e-18
RSS0716 A09 21113887 1e-126
RSS3363 A09 21228609 2e-66
RSS3627 A09 21447487 1e-96
RSS3086 A09 21448200 4e-82 LG5 108.8
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517


MarkerDB | Raphanus sativus