Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS1125 A09 36145516 4e-43
RSS1126 A09 35385801 1e-114
RSS1128 A09 3852205 1e-38 LG6 150.0
RSS1130 A09 17706109 8e-71
RSS1132 A09 26122129 1e-35
RSS1133 A09 16620679 2e-68 LG6 141.6
RSS1138 A09 37035377 2e-87
RSS1165 A09 31065840 4e-48
RSS1171 A09 29850465 2e-46
RSS1178 A09 32927640 3e-80 LG2 70.4
RSS1181 A09 15342367 1e-106
RSS1195 A09 29583391 2e-50 LG3 91.8
RSS1199 A09 32352867 1e-32
RSS1201 A09 34998429 2e-52
RSS1211 A09 15911974 6e-69
RSS1217 A09 1669210 4e-15
RSS1219 A09 16983574 1e-101
RSS1220 A09 15414443 1e-100
RSS1222 A09 6331109 5e-93
RSS1228 A09 2065363 1e-103
RSS1230 A09 31148388 1e-123
RSS1232 A09 13494186 1e-138
RSS1235 A09 14318586 8e-10
RSS1238 A09 10055837 1e-112
RSS1239 A09 7675558 3e-07
RSS1244 A09 35765517 2e-98
RSS1249_a A09 25641684 4e-53 LG4 116.8
RSS1251 A09 26478193 5e-83
RSS1256 A09 2356799 7e-72
RSS1259 A09 26524329 5e-90
RSS1280 A09 672000 9e-63
RSS1290 A09 20721280 1e-121
RSS1300 A09 3649302 5e-98
RSS1301 A09 1982997 1e-99 LG6 123.1
RSS1311 A09 29167818 1e-108
RSS1313 A09 30406912 8e-86
RSS1320 A09 30742146 3e-67
RSS1322 A09 18095846 1e-104
RSS1326 A09 24081448 9e-73
RSS1329 A09 13454348 1e-101 LG6 142.6
RSS1331 A09 28988927 2e-65
RSS1333 A09 430184 3e-11
RSS1334 A09 23322021 2e-11
RSS1340 A09 34489539 4e-35
RSS1347 A09 1285643 2e-70
RSS1349 A09 88574 7e-61
RSS1351 A09 1548980 5e-70
RSS1366 A09 10781826 1e-115
RSS1391 A09 14195088 1e-127
RSS1392 A09 31478209 2e-87
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517

MarkerDB | Raphanus sativus