Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3834 A09 9257893 1e-104
RSS3284 A09 9329712 1e-115 LG6 147.3
RSS2151 A09 9596225 3e-62
RSS0723 A09 9600970 2e-53
RSS3984 A09 9856452 1e-32
RSS1238 A09 10055837 1e-112
RSS3309 A09 10169725 3e-67
RSS1951 A09 10333424 1e-127
RSS1366 A09 10781826 1e-115
RSS3311 A09 10902874 2e-60
RSS0133 A09 11127109 6e-97
RSS2432 A09 11662982 5e-94
RSS1845 A09 11676409 6e-87
RSS1075 A09 11873197 2e-89
RSS3105 A09 11921918 8e-87
RSS3367 A09 11921981 1e-135
RSS1057 A09 12422315 8e-65
RSS0600 A09 12434510 1e-130
RSS3496 A09 12450487 8e-73
RSS0260 A09 12608965 9e-61
RSS0738 A09 12659951 1e-63
RSS0217 A09 12680853 3e-78
RSS2893 A09 12710255 2e-82
RSS2588 A09 13454342 1e-116
RSS1329 A09 13454348 1e-101 LG6 142.6
RSS1232 A09 13494186 1e-138
RSS0503 A09 13494639 5e-91
RSS0093 A09 13500731 3e-33 LG6 142.3
RSS1611 A09 13736245 6e-30
RSS3041 A09 13739057 8e-72 LG6 143.3
RSS0603 A09 13753610 1e-107 LG6 143.7
RSS0517 A09 14035295 3e-57
RSS0405 A09 14101814 3e-56
RSS1391 A09 14195088 1e-127
RSS0888 A09 14259559 6e-84
RSS1235 A09 14318586 8e-10
RSS1588 A09 14338166 9e-29
RSS1954 A09 14378436 2e-83 LG6 130.9
RSS2673 A09 14522376 3e-16
RSS2533_a A09 14807556 8e-46 LG7 94.8
RSS3706 A09 14807720 5e-73
RSS1607 A09 14854105 4e-31
RSS2241 A09 14868361 2e-70
RSS0261 A09 15158697 3e-58
RSS1181 A09 15342367 1e-106
RSS1676 A09 15381444 3e-59
RSS0436 A09 15414176 3e-88
RSS1220 A09 15414443 1e-100
RSS3471 A09 15416037 6e-47
RSS3176 A09 15438009 1e-104
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517


MarkerDB | Raphanus sativus