Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS0723 A09 9600970 2e-53
RSS0732 A09 773360 1e-100
RSS0738 A09 12659951 1e-63
RSS0740 A09 32780956 4e-97
RSS0746 A09 36546166 4e-16
RSS0753 A09 24073027 1e-69
RSS0754 A09 26707219 1e-104
RSS0767 A09 3468424 2e-73
RSS0769 A09 26764595 2e-72 LG3 77.2
RSS0785 A09 16846826 6e-83
RSS0786 A09 35796675 6e-29
RSS0798 A09 3389475 1e-119
RSS0800 A09 15678822 1e-97
RSS0810 A09 33655014 5e-76 LG3 70.8
RSS0820 A09 184483 7e-61
RSS0847 A09 4772256 5e-64
RSS0851 A09 28210855 8e-93
RSS0855 A09 32753945 1e-121
RSS0859 A09 28368752 1e-110
RSS0866 A09 28061171 2e-78 LG3 83.7
RSS0870 A09 27000134 2e-83
RSS0878 A09 30864072 6e-56
RSS0882 A09 4387977 1e-120
RSS0888 A09 14259559 6e-84
RSS0908 A09 36161641 1e-82
RSS0927 A09 16846032 1e-111
RSS0949 A09 32667271 5e-66
RSS0951 A09 31310823 3e-69
RSS0953 A09 26940345 3e-43 LG1 21.2
RSS0956 A09 32305958 3e-31
RSS0960 A09 26786366 2e-28
RSS0962 A09 3147370 1e-76
RSS0964 A09 5698103 4e-25
RSS0967 A09 33354042 2e-57
RSS0983 A09 15750929 4e-84
RSS0987 A09 32645341 9e-39 LG9 48.2
RSS0990 A09 23728506 1e-111
RSS0992 A09 28668852 8e-67
RSS1004 A09 3948837 1e-103
RSS1013 A09 4246948 1e-102
RSS1020 A09 5047590 5e-42 LG2 104.3
RSS1025 A09 28890015 6e-64
RSS1035 A09 15897141 5e-58 LG6 138.9
RSS1044 A09 36877230 1e-63
RSS1053 A09 8283682 2e-82
RSS1057 A09 12422315 8e-65
RSS1075 A09 11873197 2e-89
RSS1089 A09 2940354 1e-104
RSS1099 A09 28796554 1e-66
RSS1114 A09 34796358 8e-86
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517

MarkerDB | Raphanus sativus