Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3027 A09 1098965 4e-53
RSS0070 A09 1111596 7e-78
RSS1399 A09 1151975 1e-107
RSS3813 A09 1167081 2e-37
RSS3988 A09 1189216 7e-36
RSS2345 A09 1209842 1e-123
RSS1347 A09 1285643 2e-70
RSS3116 A09 1318617 3e-77
RSS1857 A09 1339540 1e-137
RSS2347 A09 1485049 5e-63
RSS1923 A09 1539646 2e-79
RSS2229 A09 1547312 1e-103
RSS1351 A09 1548980 5e-70
RSS0540 A09 1562313 3e-07
RSS2388 A09 1562966 5e-43
RSS0397 A09 1564185 1e-88
RSS2185 A09 1569202 1e-114
RSS1723 A09 1600049 1e-146
RSS2199 A09 1611784 3e-41
RSS1606 A09 1666066 1e-06
RSS1217 A09 1669210 4e-15
RSS3959 A09 1841938 1e-119
RSS3127 A09 2043906 1e-115
RSS1228 A09 2065363 1e-103
RSS3275 A09 2144512 5e-95
RSS3469 A09 2145572 2e-74
RSS3220 A09 2174026 1e-82
RSS3900 A09 2240543 9e-93
RSS0016 A09 2289853 9e-61
RSS1256 A09 2356799 7e-72
RSS1616 A09 2593400 1e-79
RSS0316 A09 2626612 2e-90
RSS1851 A09 2648798 1e-56
RSS2145 A09 2700466 1e-120
RSS1089 A09 2940354 1e-104
RSS0376 A09 2977266 7e-29
RSS0962 A09 3147370 1e-76
RSS1820 A09 3149711 2e-77
RSS3108 A09 3231883 8e-89
RSS2353 A09 3277120 6e-81
RSS2043 A09 3360183 9e-96
RSS0798 A09 3389475 1e-119
RSS0709 A09 3419445 2e-97
RSS0767 A09 3468424 2e-73
RSS3557 A09 3512462 3e-55
RSS0597 A09 3634888 6e-47
RSS3373 A09 3642011 4e-83
RSS0421 A09 3642339 1e-99
RSS1300 A09 3649302 5e-98
RSS3655 A09 3657616 1e-93
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517


MarkerDB | Raphanus sativus