Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS0376 A09 2977266 7e-29
RSS0397 A09 1564185 1e-88
RSS0405 A09 14101814 3e-56
RSS0416 A09 20133096 9e-74
RSS0417 A09 35751292 9e-76
RSS0421 A09 3642339 1e-99
RSS0424 A09 21450919 1e-76
RSS0428 A09 151560 1e-146
RSS0436 A09 15414176 3e-88
RSS0442 A09 22135198 1e-108 LG9 24.2
RSS0452 A09 7340773 1e-102
RSS0478 A09 4105238 5e-80
RSS0487 A09 8889869 5e-89
RSS0489 A09 32860452 1e-119 LG2 71.6
RSS0494 A09 26141859 1e-101 LG2 82.5
RSS0501 A09 5412885 1e-102
RSS0503 A09 13494639 5e-91
RSS0506 A09 32925916 1e-85
RSS0514 A09 5070329 8e-97
RSS0517 A09 14035295 3e-57
RSS0524 A09 28925362 1e-103
RSS0534 A09 3736025 1e-99
RSS0535 A09 35549377 1e-116
RSS0537 A09 15728883 1e-116
RSS0540 A09 1562313 3e-07
RSS0560 A09 29885091 1e-104
RSS0562 A09 27920992 7e-82
RSS0574 A09 29177913 6e-72 LG3 90.5
RSS0579 A09 7793912 1e-117
RSS0583 A09 28890218 3e-86
RSS0597 A09 3634888 6e-47
RSS0600 A09 12434510 1e-130
RSS0603 A09 13753610 1e-107 LG6 143.7
RSS0623 A09 30265333 2e-63
RSS0639 A09 6710098 1e-131
RSS0652 A09 4096039 1e-110
RSS0653 A09 30771447 5e-68
RSS0658 A09 7200920 1e-58
RSS0661 A09 27070754 4e-32
RSS0663 A09 185697 7e-70
RSS0670 A09 15493204 3e-08
RSS0673 A09 26030443 9e-34
RSS0677 A09 36359399 4e-26
RSS0679 A09 21760400 4e-51 LG9 24.9
RSS0686 A09 34222879 1e-109
RSS0687 A09 30180768 1e-123
RSS0698 A09 4889786 3e-84
RSS0705 A09 23993979 2e-73
RSS0709 A09 3419445 2e-97
RSS0716 A09 21113887 1e-126
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517

MarkerDB | Raphanus sativus