Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS1954 A09 14378436 2e-83 LG6 130.9
RSS1035 A09 15897141 5e-58 LG6 138.9
RSS3287 A09 15824141 1e-19 LG6 140.1
RSS1133 A09 16620679 2e-68 LG6 141.6
RSS0093 A09 13500731 3e-33 LG6 142.3
RSS1329 A09 13454348 1e-101 LG6 142.6
RSS3041 A09 13739057 8e-72 LG6 143.3
RSS0603 A09 13753610 1e-107 LG6 143.7
RSS3284 A09 9329712 1e-115 LG6 147.3
RSS0155 A09 3157682 7e-82 LG6 148.5
RSS1128 A09 3852205 1e-38 LG6 150.0
RSS2113 A09 4310373 5e-07 LG6 151.4
RSS1425 A09 3189030 2e-97 LG6 153.2
RSS3836 A09 32724908 1e-136 LG7 0.0
RSS0327 A09 33165808 2e-73 LG7 21.0
RSS0066 A09 4909427 1e-102 LG7 23.1
RSS1844 A09 24351140 8e-65 LG7 56.3
RSS2533_a A09 14807556 8e-46 LG7 94.8
RSS3186 A09 37000692 1e-123 LG8 19.3
RSS1998 A09 4610380 1e-138 LG9 9.9
RSS2552 A09 18921838 3e-99 LG9 15.4
RSS3818 A09 22769574 2e-23 LG9 20.7
RSS0442 A09 22135198 1e-108 LG9 24.2
RSS0679 A09 21760400 4e-51 LG9 24.9
RSS2843 A09 22602281 4e-58 LG9 26.4
RSS2045 A09 22643444 4e-85 LG9 26.4
RSS4011 A09 23132061 1e-103 LG9 32.0
RSS0325 A09 23230003 1e-110 LG9 32.5
RSS1453 A09 23324432 1e-79 LG9 33.2
RSS1945 A09 24510348 5e-48 LG9 41.0
RSS0987 A09 32645341 9e-39 LG9 48.2
RSS3298 A09 35643892 5e-58 LG9 76.2
RSS1349 A09 88574 7e-61
RSS1522 A09 92026 4e-99
RSS0428 A09 151560 1e-146
RSS0820 A09 184483 7e-61
RSS0663 A09 185697 7e-70
RSS1333 A09 430184 3e-11
RSS2398 A09 430184 9e-11
RSS2201 A09 559079 1e-101
RSS0349 A09 560374 1e-14
RSS3478 A09 593162 9e-44
RSS2637 A09 622683 1e-129
RSS1280 A09 672000 9e-63
RSS0732 A09 773360 1e-100
RSS3576 A09 773841 2e-87
RSS2023 A09 881004 6e-30
RSS1662 A09 943209 5e-48
RSS2959 A09 950243 8e-70
RSS2051 A09 1032775 1e-109
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517

MarkerDB | Raphanus sativus