Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517

Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3900 A09 2240543 9e-93
RSS3929 A09 34751564 4e-62
RSS3930 A09 32282642 2e-33
RSS3937 A09 32024956 5e-48 LG2 106.3
RSS3945 A09 6532031 4e-90
RSS3957 A09 26326384 1e-43
RSS3959 A09 1841938 1e-119
RSS3982 A09 32030108 1e-108
RSS3984 A09 9856452 1e-32
RSS3988 A09 1189216 7e-36
RSS4011 A09 23132061 1e-103 LG9 32.0
RSS4013 A09 31646857 4e-85
RSS4014 A09 34808834 1e-119
RSS4016 A09 4127487 2e-74
RSS4020 A09 23727502 6e-45
RSS4028 A09 5254596 2e-67
RSS4029 A09 32054999 1e-82
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517

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