Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS3477 A09 32276004 1e-107
RSS3478 A09 593162 9e-44
RSS3484 A09 22970878 1e-52
RSS3488 A09 27477858 6e-23
RSS3496 A09 12450487 8e-73
RSS3515 A09 31336571 4e-80 LG4 57.1
RSS3519 A09 36415536 7e-79
RSS3522 A09 19582126 4e-79
RSS3557 A09 3512462 3e-55
RSS3576 A09 773841 2e-87
RSS3577 A09 25963120 4e-12
RSS3608 A09 5485716 1e-121
RSS3622 A09 36223471 2e-56
RSS3627 A09 21447487 1e-96
RSS3628 A09 25936443 8e-72
RSS3650 A09 31375628 3e-85
RSS3655 A09 3657616 1e-93
RSS3656 A09 35796675 2e-39
RSS3658 A09 32504116 5e-76
RSS3666 A09 34578075 2e-60 LG3 95.8
RSS3670 A09 31388294 0.19
RSS3677 A09 23324915 1e-21
RSS3679 A09 31852706 9e-90
RSS3683 A09 29068681 3e-95
RSS3706 A09 14807720 5e-73
RSS3712 A09 29743326 9e-41
RSS3767 A09 32037953 5e-52
RSS3769 A09 6660049 4e-87
RSS3775 A09 15796832 2e-59
RSS3780 A09 33412925 7e-67
RSS3782 A09 31800428 8e-68
RSS3786 A09 17166917 2e-88
RSS3790 A09 8255258 1e-104
RSS3791 A09 4362415 1e-105
RSS3801 A09 8254751 3e-72
RSS3813 A09 1167081 2e-37
RSS3818 A09 22769574 2e-23 LG9 20.7
RSS3824 A09 5502217 5e-32
RSS3831 A09 8749663 1e-101
RSS3834 A09 9257893 1e-104
RSS3836 A09 32724908 1e-136 LG7 0.0
RSS3852 A09 36227747 2e-93
RSS3860 A09 34850572 2e-74
RSS3864 A09 30858112 3e-57 LG2 96.4
RSS3865 A09 31679910 9e-69
RSS3871 A09 5483613 1e-146
RSS3874 A09 28916328 1e-100
RSS3879 A09 36415982 4e-75
RSS3889 A09 31898167 1e-53
RSS3897 A09 26326318 7e-58 LG4 7.1
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517

MarkerDB | Raphanus sativus