Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS2976 A09 32701170 4e-57
RSS3836 A09 32724908 1e-136 LG7 0.0
RSS0855 A09 32753945 1e-121
RSS0740 A09 32780956 4e-97
RSS0489 A09 32860452 1e-119 LG2 71.6
RSS0506 A09 32925916 1e-85
RSS1178 A09 32927640 3e-80 LG2 70.4
RSS3255 A09 32948900 1e-147
RSS0327 A09 33165808 2e-73 LG7 21.0
RSS0967 A09 33354042 2e-57
RSS3780 A09 33412925 7e-67
RSS3355 A09 33593752 1e-122
RSS2344 A09 33600181 2e-38
RSS3226 A09 33631631 5e-49
RSS0810 A09 33655014 5e-76 LG3 70.8
RSS2481 A09 33683979 6e-47
RSS2570 A09 33784601 1e-120
RSS1448 A09 33828546 1e-117
RSS1764 A09 34176426 5e-10
RSS0686 A09 34222879 1e-109
RSS1471 A09 34446470 1e-114
RSS1340 A09 34489539 4e-35
RSS3666 A09 34578075 2e-60 LG3 95.8
RSS2349 A09 34669101 3e-71
RSS0192 A09 34745121 3e-93 LG3 110.4
RSS3929 A09 34751564 4e-62
RSS2519 A09 34765467 1e-101
RSS1114 A09 34796358 8e-86
RSS4014 A09 34808834 1e-119
RSS3860 A09 34850572 2e-74
RSS2831 A09 34949909 4e-96 LG3 73.4
RSS2954 A09 34981178 4e-77
RSS1201 A09 34998429 2e-52
RSS1865 A09 35112079 1e-112
RSS3043 A09 35152100 6e-90 LG3 73.7
RSS1941 A09 35250171 5e-14
RSS1417 A09 35369268 1e-77
RSS1126 A09 35385801 1e-114
RSS1405 A09 35527384 2e-85
RSS0535 A09 35549377 1e-116
RSS3434 A09 35639770 2e-38
RSS3298 A09 35643892 5e-58 LG9 76.2
RSS2295 A09 35692887 9e-30
RSS0417 A09 35751292 9e-76
RSS1244 A09 35765517 2e-98
RSS3656 A09 35796675 2e-39
RSS0786 A09 35796675 6e-29
RSS2090 A09 35971230 1e-97 LG3 69.2
RSS1125 A09 36145516 4e-43
RSS0908 A09 36161641 1e-82
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517


MarkerDB | Raphanus sativus