Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS0004 A09 18993624 6e-20
RSS0016 A09 2289853 9e-61
RSS0032 A09 20410177 1e-108
RSS0040 A09 9143348 1e-106
RSS0045 A09 7076076 1e-129
RSS0064 A09 28595128 7e-21
RSS0066 A09 4909427 1e-102 LG7 23.1
RSS0068 A09 28048707 1e-48 LG3 82.3
RSS0070 A09 1111596 7e-78
RSS0090 A09 4207774 1e-72
RSS0093 A09 13500731 3e-33 LG6 142.3
RSS0102 A09 27312514 4e-96
RSS0104 A09 21969914 2e-35
RSS0117 A09 7549576 3e-62
RSS0131 A09 24285275 5e-84
RSS0133 A09 11127109 6e-97
RSS0146 A09 27730586 2e-36
RSS0154 A09 28885583 6e-59 LG3 87.6
RSS0155 A09 3157682 7e-82 LG6 148.5
RSS0157 A09 31607564 1e-114
RSS0162 A09 28668852 1e-110
RSS0170 A09 23910714 3e-92
RSS0178 A09 1510615 4e-90 LG4 110.0
RSS0181 A09 29309775 3e-85
RSS0192 A09 34745121 3e-93 LG3 110.4
RSS0193 A09 28312131 6e-26 LG3 86.6
RSS0195 A09 32220157 2e-71
RSS0200 A09 4610359 1e-109
RSS0212 A09 8367473 1e-124
RSS0217 A09 12680853 3e-78
RSS0232 A09 20421548 1e-124
RSS0240 A09 31335354 1e-118
RSS0248 A09 30601051 6e-50
RSS0260 A09 12608965 9e-61
RSS0261 A09 15158697 3e-58
RSS0270 A09 36545555 3e-65
RSS0285 A09 31572650 1e-120
RSS0286 A09 31475506 1e-104
RSS0301 A09 28871877 1e-112
RSS0309 A09 25340030 5e-81
RSS0316 A09 2626612 2e-90
RSS0322 A09 27909159 2e-04
RSS0325 A09 23230003 1e-110 LG9 32.5
RSS0327 A09 33165808 2e-73 LG7 21.0
RSS0346 A09 17459846 4e-82
RSS0348 A09 28595297 1e-92
RSS0349 A09 560374 1e-14
RSS0353 A09 27070484 4e-80
RSS0357 A09 7793894 7e-95
RSS0375 A09 20066133 1e-33 LG4 9.3
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517

MarkerDB | Raphanus sativus