Radish Marker Database

B. rapa genome (v1.2) list : A08

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 282


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS0406 A08 19409253 2e-40 LG2 78.0
RSS2818 A08 19691147 1e-126 LG4 8.1
RSS0008 A08 7712349 4e-39 LG4 75.7
RSS1635 A08 11859186 3e-72 LG5 38.2
RSS0445 A08 13963820 1e-68 LG5 121.7
RSS0331 A08 15238542 9e-79 LG5 131.8
RSS0073_a A08 15700017 6e-63 LG5 134.3
RSS0251 A08 15740612 2e-89 LG5 134.4
RSS2286 A08 21210577 1e-96 LG7 13.3
RSS0027 A08 20616128 3e-27 LG7 15.1
RSS3273 A08 19808857 1e-88 LG7 16.9
RSS2157 A08 19821877 3e-61 LG7 17.1
RSS3614 A08 19202241 1e-109 LG7 20.7
RSS3034 A08 19258409 2e-73 LG7 21.3
RSS2901 A08 19167341 1e-66 LG7 22.0
RSS2460 A08 19123245 2e-88 LG7 22.5
RSS1295 A08 17534595 2e-53 LG7 28.4
RSS1585 A08 17574033 7e-87 LG7 30.3
RSS2489 A08 17270930 6e-60 LG7 31.7
RSS2610 A08 17209588 3e-33 LG7 32.2
RSS0919 A08 17387862 3e-93 LG7 33.2
RSS3738 A08 16780405 7e-96 LG7 34.9
RSS0382 A08 16789025 9e-56 LG7 34.9
RSS3174 A08 16673737 2e-79 LG7 36.7
RSS3178 A08 16572503 8e-50 LG7 37.1
RSS0073 A08 15700017 6e-63 LG7 41.6
RSS2248 A08 15098894 1e-53 LG7 43.3
RSS1175 A08 14201100 6e-11 LG7 48.3
RSS2735 A08 13040746 3e-56 LG7 53.3
RSS3270 A08 13404134 8e-60 LG7 54.0
RSS1680 A08 12517460 1e-113 LG7 55.8
RSS1747 A08 8589837 1e-13 LG7 58.6
RSS1330 A08 12132910 1e-89 LG7 59.5
RSS0615 A08 13275346 4e-42 LG7 60.3
RSS0790 A08 6096081 2e-92 LG7 75.8
RSS0015 A08 8491961 2e-72 LG7 79.3
RSS1769 A08 3548954 1e-69 LG7 82.4
RSS0042 A08 1860706 1e-89 LG7 84.1
RSS2196 A08 1881146 8e-54 LG7 84.2
RSS0974 A08 2014689 6e-93 LG7 84.2
RSS1208 A08 604925 1e-125 LG7 84.5
RSS2613 A08 573018 4e-55 LG7 84.6
RSS2703 A08 2677098 9e-67 LG7 87.1
RSS3445 A08 2014654 1e-61 LG7 100.3
RSS0923 A08 7584338 5e-90 LG9 16.4
RSS3638 A08 16673737 1e-78 LG9 26.4
RSS2326 A08 13199652 1e-114 LG9 39.7
RSS2037 A08 21017831 1e-93 LG9 69.2
RSS1748 A08 318225 7e-48
RSS2161 A08 383156 1e-39
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 282

MarkerDB | Raphanus sativus