Radish Marker Database

B. rapa genome (v1.2) list : A08

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 282


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS1748 A08 318225 7e-48
RSS2161 A08 383156 1e-39
RSS2689 A08 384664 1e-131
RSS3505 A08 534768 8e-55
RSS2613 A08 573018 4e-55 LG7 84.6
RSS1922 A08 575951 8e-57
RSS1208 A08 604925 1e-125 LG7 84.5
RSS0100 A08 700716 7e-76
RSS0764 A08 783494 1e-79
RSS0161 A08 805959 1e-114
RSS0516 A08 889207 7e-81
RSS1512 A08 973488 2e-78
RSS0544 A08 973554 7e-78
RSS1091 A08 975546 1e-108
RSS3351 A08 1486144 1e-104
RSS2363 A08 1500125 2e-83
RSS0707 A08 1573726 7e-69
RSS3776 A08 1614629 7e-04
RSS0042 A08 1860706 1e-89 LG7 84.1
RSS2196 A08 1881146 8e-54 LG7 84.2
RSS3445 A08 2014654 1e-61 LG7 100.3
RSS0974 A08 2014689 6e-93 LG7 84.2
RSS2621 A08 2333067 1e-16
RSS0548 A08 2442393 2e-86
RSS0963 A08 2516407 1e-123
RSS2703 A08 2677098 9e-67 LG7 87.1
RSS1407 A08 2758143 5e-91
RSS1003 A08 3222476 2e-92
RSS1477 A08 3426188 1e-104
RSS3048 A08 3540471 6e-93
RSS1769 A08 3548954 1e-69 LG7 82.4
RSS3550 A08 4094140 9e-57
RSS0854 A08 4094209 1e-104
RSS0787 A08 4183702 5e-27
RSS2117 A08 4323943 1e-41
RSS1957 A08 4429110 7e-07
RSS0821 A08 4675617 8e-84
RSS2717 A08 4700899 8e-29
RSS1799 A08 4700899 3e-28
RSS0724 A08 5048285 1e-144
RSS1852 A08 5542224 1e-119
RSS0790 A08 6096081 2e-92 LG7 75.8
RSS2827 A08 6167514 3e-92
RSS2639 A08 6265474 1e-104
RSS1760 A08 6536602 1e-94
RSS3144 A08 6669161 6e-66
RSS1033 A08 6972601 1e-70
RSS3231 A08 7085006 5e-96
RSS3789 A08 7176017 2e-98
RSS2469 A08 7339032 4e-52
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 282


MarkerDB | Raphanus sativus