Radish Marker Database

B. rapa genome (v1.2) list : A08

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 282


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2735 A08 13040746 3e-56 LG7 53.3
RSS2746 A08 21008672 2e-72
RSS2785 A08 8070985 2e-48
RSS2809 A08 19603825 3e-94
RSS2818 A08 19691147 1e-126 LG4 8.1
RSS2827 A08 6167514 3e-92
RSS2829 A08 11685844 6e-28
RSS2883 A08 12822641 4e-59
RSS2901 A08 19167341 1e-66 LG7 22.0
RSS2912 A08 16117358 6e-28
RSS2920 A08 14199489 5e-68
RSS2930 A08 8857865 3e-89
RSS3008 A08 14617639 3e-67
RSS3034 A08 19258409 2e-73 LG7 21.3
RSS3038 A08 16361735 1e-103
RSS3044 A08 18302344 1e-103
RSS3048 A08 3540471 6e-93
RSS3070 A08 10812844 1e-56
RSS3083 A08 19082840 7e-95
RSS3096 A08 15290034 1e-101
RSS3144 A08 6669161 6e-66
RSS3165 A08 17380191 1e-34
RSS3174 A08 16673737 2e-79 LG7 36.7
RSS3178 A08 16572503 8e-50 LG7 37.1
RSS3179 A08 19789055 1e-66
RSS3201 A08 17004541 2e-60
RSS3203 A08 21292293 3e-34
RSS3229 A08 8596433 8e-89
RSS3231 A08 7085006 5e-96
RSS3258 A08 19317272 7e-41
RSS3270 A08 13404134 8e-60 LG7 54.0
RSS3273 A08 19808857 1e-88 LG7 16.9
RSS3293 A08 21311110 5e-78
RSS3350 A08 17128153 1e-104
RSS3351 A08 1486144 1e-104
RSS3371 A08 16716734 1e-105
RSS3374 A08 8723218 2e-67
RSS3386 A08 15738173 1e-88
RSS3389 A08 19542728 2e-68
RSS3445 A08 2014654 1e-61 LG7 100.3
RSS3505 A08 534768 8e-55
RSS3513 A08 19070333 1e-116
RSS3532 A08 14312549 2e-44
RSS3533 A08 12297702 6e-73
RSS3539 A08 16026413 8e-60
RSS3548 A08 18780024 1e-35
RSS3550 A08 4094140 9e-57
RSS3561 A08 18339216 2e-86
RSS3564 A08 19708562 1e-113
RSS3578 A08 18079688 2e-08
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 282

MarkerDB | Raphanus sativus