Radish Marker Database

B. rapa genome (v1.2) list : A08

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 282


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS1297 A08 19878157 1e-68
RSS1330 A08 12132910 1e-89 LG7 59.5
RSS1344 A08 15872375 1e-120
RSS1350 A08 21484761 8e-75
RSS1358 A08 17610775 3e-77
RSS1385 A08 18568663 6e-81
RSS1386 A08 14359262 1e-122
RSS1407 A08 2758143 5e-91
RSS1420 A08 8870434 3e-62
RSS1467 A08 16520594 1e-136
RSS1477 A08 3426188 1e-104
RSS1480 A08 17981416 1e-103
RSS1485 A08 14744695 1e-93
RSS1512 A08 973488 2e-78
RSS1525 A08 20916323 1e-105
RSS1545 A08 15121128 1e-145
RSS1553 A08 7544527 1e-101
RSS1563 A08 12002921 1e-123
RSS1566 A08 16149029 9e-71
RSS1585 A08 17574033 7e-87 LG7 30.3
RSS1589 A08 17260067 1e-53
RSS1615 A08 16309791 2e-52
RSS1624 A08 18944715 1e-103
RSS1635 A08 11859186 3e-72 LG5 38.2
RSS1680 A08 12517460 1e-113 LG7 55.8
RSS1687 A08 12520149 2e-33
RSS1714 A08 14767881 5e-95
RSS1716 A08 19558372 1e-110
RSS1722 A08 21520224 1e-28
RSS1725 A08 7573764 5e-97
RSS1745 A08 8054391 1e-112
RSS1747 A08 8589837 1e-13 LG7 58.6
RSS1748 A08 318225 7e-48
RSS1760 A08 6536602 1e-94
RSS1769 A08 3548954 1e-69 LG7 82.4
RSS1799 A08 4700899 3e-28
RSS1846 A08 19306219 1e-70
RSS1852 A08 5542224 1e-119
RSS1869 A08 11788180 1e-134
RSS1890 A08 7939719 2e-36
RSS1892 A08 15237467 1e-62
RSS1922 A08 575951 8e-57
RSS1957 A08 4429110 7e-07
RSS1978 A08 17981396 1e-117
RSS2014 A08 17603401 4e-95
RSS2016 A08 15121827 1e-103
RSS2021 A08 18960035 1e-105
RSS2037 A08 21017831 1e-93 LG9 69.2
RSS2085 A08 20989606 1e-52
RSS2098 A08 14564748 1e-35
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 282

MarkerDB | Raphanus sativus