Radish Marker Database

B. rapa genome (v1.2) list : A08

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 282


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3817 A08 12576610 1e-109
RSS3587 A08 12577033 1e-120
RSS0246 A08 12579472 6e-61
RSS1096 A08 12579472 2e-66
RSS2564 A08 12770204 7e-98
RSS3825 A08 12774887 1e-35
RSS2883 A08 12822641 4e-59
RSS2334 A08 13030836 3e-51
RSS2735 A08 13040746 3e-56 LG7 53.3
RSS0274 A08 13173991 8e-74
RSS2326 A08 13199652 1e-114 LG9 39.7
RSS0615 A08 13275346 4e-42 LG7 60.3
RSS2454 A08 13291025 1e-109
RSS0811 A08 13321021 1e-106
RSS3270 A08 13404134 8e-60 LG7 54.0
RSS1122 A08 13406896 1e-117
RSS2510 A08 13691109 3e-71
RSS0669 A08 13692476 1e-91
RSS2291 A08 13730656 1e-132
RSS1263 A08 13731801 6e-46
RSS3613 A08 13731834 1e-140
RSS0445 A08 13963820 1e-68 LG5 121.7
RSS3651 A08 14097965 3e-09
RSS2920 A08 14199489 5e-68
RSS1175 A08 14201100 6e-11 LG7 48.3
RSS3532 A08 14312549 2e-44
RSS1386 A08 14359262 1e-122
RSS0359 A08 14432251 2e-74
RSS0328 A08 14434201 8e-82
RSS2098 A08 14564748 1e-35
RSS3008 A08 14617639 3e-67
RSS1485 A08 14744695 1e-93
RSS2542 A08 14766924 2e-92
RSS1714 A08 14767881 5e-95
RSS3625 A08 14909622 1e-107
RSS1264 A08 14963201 1e-122
RSS2248 A08 15098894 1e-53 LG7 43.3
RSS1545 A08 15121128 1e-145
RSS2016 A08 15121827 1e-103
RSS1892 A08 15237467 1e-62
RSS0331 A08 15238542 9e-79 LG5 131.8
RSS0629 A08 15239986 3e-30
RSS3987 A08 15250882 1e-40
RSS3096 A08 15290034 1e-101
RSS2154 A08 15311580 6e-40
RSS0101 A08 15312872 1e-69
RSS0083 A08 15369079 6e-67
RSS2709 A08 15450383 7e-98
RSS0861 A08 15612552 7e-88
RSS0073 A08 15700017 6e-63 LG7 41.6
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 282


MarkerDB | Raphanus sativus