Radish Marker Database

B. rapa genome (v1.2) list : A07

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 362


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3415 A07 7796853 1e-103
RSS3444 A07 9351177 8e-75
RSS3446 A07 21397396 2e-30
RSS3458 A07 21153617 4e-41
RSS3479 A07 10662316 1e-47
RSS3481 A07 9046397 2e-50
RSS3486 A07 21806161 1e-135
RSS3494 A07 15574023 1e-138
RSS3497 A07 9109017 2e-39
RSS3508 A07 22183579 4e-86
RSS3510 A07 17086020 1e-138
RSS3514 A07 1091157 5e-74
RSS3517 A07 22466986 1e-116
RSS3549 A07 9830817 4e-98
RSS3567 A07 17690066 0.035
RSS3569 A07 11132967 4e-99
RSS3584 A07 21987577 7e-94
RSS3585 A07 14650635 4e-89
RSS3611 A07 916711 9e-39
RSS3615 A07 14839902 5e-95 LG1 66.1
RSS3624 A07 17171457 8e-82
RSS3626 A07 13993009 5e-90
RSS3646 A07 9115567 0.067
RSS3672 A07 19390140 0.59
RSS3678 A07 21074255 4e-50
RSS3684 A07 18829685 1e-115
RSS3687 A07 19600528 3e-86
RSS3688 A07 13473848 1e-115
RSS3695 A07 16449665 4e-74
RSS3703 A07 19736239 1e-115
RSS3708 A07 7266155 2e-95
RSS3711 A07 9638053 3e-90
RSS3713 A07 16618010 2e-50
RSS3729 A07 18781501 2e-10 LG1 17.8
RSS3731 A07 8561751 6e-86
RSS3748 A07 9766344 1e-82
RSS3757 A07 11701857 2e-99
RSS3764 A07 20604394 0.46
RSS3821 A07 18977766 8e-92 LG6 23.5
RSS3835 A07 19459999 1e-99 LG6 29.7
RSS3846 A07 14293609 0.011
RSS3877 A07 11868958 3e-86
RSS3883 A07 16979350 2e-45
RSS3886 A07 11303345 2e-06
RSS3893 A07 12411377 1e-129 LG1 22.6
RSS3912 A07 8953397 1e-112
RSS3917 A07 4517262 1e-171
RSS3920 A07 18627475 1e-114
RSS3922 A07 13702440 2e-91 LG1 31.4
RSS3946 A07 7542197 9e-83
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 362


MarkerDB | Raphanus sativus