Radish Marker Database

B. rapa genome (v1.2) list : A07

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 362


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS3362 A07 20268516 5e-85 LG1 83.9
RSS2659 A07 20378639 4e-33
RSS1024 A07 20384921 5e-56
RSS1781 A07 20388372 1e-118 LG1 66.9
RSS1461 A07 20453351 1e-55
RSS2183 A07 20481206 2e-84
RSS1993 A07 20481638 1e-104
RSS0710 A07 20545178 4e-29
RSS0577 A07 20545913 1e-62 LG1 71.7
RSS3764 A07 20604394 0.46
RSS0745 A07 20715464 1e-147
RSS1560 A07 20773769 5e-44
RSS0675 A07 20814863 8e-93 LG1 70.6
RSS2641 A07 20848338 2e-84
RSS2535 A07 20848358 1e-100
RSS1356 A07 20851118 1e-128
RSS2593 A07 20869349 2e-06 LG1 65.5
RSS3091 A07 20869454 5e-49 LG1 65.4
RSS1103 A07 20951201 8e-54
RSS3202 A07 20964288 4e-23
RSS3189 A07 21022894 9e-74
RSS3366 A07 21028570 5e-98
RSS3678 A07 21074255 4e-50
RSS1896 A07 21082508 3e-82 LG1 64.2
RSS2060 A07 21107913 2e-46
RSS1241 A07 21108797 9e-64 LG1 63.8
RSS3458 A07 21153617 4e-41
RSS0043 A07 21228676 6e-36 LG1 63.6
RSS0893 A07 21228721 1e-85 LG1 63.4
RSS3281 A07 21243401 1e-147
RSS0747 A07 21243404 5e-59
RSS0564 A07 21316421 3e-68
RSS1826 A07 21351194 1e-117
RSS0763 A07 21352439 1e-105
RSS3446 A07 21397396 2e-30
RSS2810 A07 21464064 1e-104
RSS1059 A07 21464127 1e-113
RSS2348 A07 21534254 0.18
RSS2693 A07 21620122 8e-83
RSS2980 A07 21624565 1e-116
RSS2187 A07 21676148 1e-111
RSS3486 A07 21806161 1e-135
RSS1419 A07 21849499 4e-69
RSS2819 A07 21851287 5e-82
RSS4036 A07 21969175 2e-14 LG6 13.5
RSS3584 A07 21987577 7e-94
RSS1100 A07 22003316 6e-95
RSS0005 A07 22034731 3e-78
RSS3342 A07 22041486 3e-78
RSS2739 A07 22041501 1e-20
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 362

MarkerDB | Raphanus sativus