Radish Marker Database

B. rapa genome (v1.2) list : A07

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 362


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2839 A07 17725622 7e-04
RSS2867 A07 9836539 1e-124
RSS2869 A07 17435613 6e-61
RSS2871 A07 11591761 1e-14 LG1 20.8
RSS2886 A07 3918357 2e-68
RSS2896 A07 491752 7e-67
RSS2905 A07 8513125 1e-19
RSS2908 A07 19807794 1e-30
RSS2925 A07 2370174 2e-61
RSS2958 A07 17423374 8e-95 LG5 21.2
RSS2971 A07 19438908 1e-123
RSS2980 A07 21624565 1e-116
RSS2993 A07 101507 1e-117
RSS3009 A07 1590183 1e-112
RSS3015 A07 15981801 2e-17 LG3 147.9
RSS3022 A07 7508458 1e-57
RSS3033 A07 17801089 2e-29
RSS3057 A07 17604325 1e-125
RSS3058 A07 14598884 1e-103
RSS3074 A07 2748140 1e-81
RSS3084 A07 14302856 2e-98
RSS3091 A07 20869454 5e-49 LG1 65.4
RSS3093 A07 17894424 1e-140
RSS3135 A07 18235779 1e-143
RSS3157 A07 7057422 1e-37
RSS3189 A07 21022894 9e-74
RSS3192 A07 10968794 2e-63
RSS3202 A07 20964288 4e-23
RSS3209 A07 8889546 1e-114
RSS3210 A07 18743716 4e-95
RSS3221 A07 10209023 1e-105
RSS3239 A07 13969154 7e-91
RSS3242 A07 14336123 8e-64
RSS3259 A07 19580147 3e-85
RSS3262 A07 13700822 3e-62 LG1 31.4
RSS3281 A07 21243401 1e-147
RSS3315 A07 19119194 8e-76
RSS3317 A07 18026735 2e-88
RSS3325 A07 12302638 1e-123
RSS3341 A07 10470776 2e-92
RSS3342 A07 22041486 3e-78
RSS3360 A07 6641320 1e-65
RSS3362 A07 20268516 5e-85 LG1 83.9
RSS3364 A07 15028217 8e-84
RSS3366 A07 21028570 5e-98
RSS3375 A07 1584159 1e-113
RSS3378 A07 288285 0.013 LG9 7.3
RSS3384 A07 19300968 1e-88
RSS3391 A07 16114982 2e-15
RSS3395 A07 11613442 1e-61
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 362

MarkerDB | Raphanus sativus