Radish Marker Database

B. rapa genome (v1.2) list : A07

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 362


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2305 A07 16814116 1e-97
RSS2313 A07 13964067 1e-105
RSS2325 A07 13700822 1e-100
RSS2333 A07 17125309 3e-87
RSS2348 A07 21534254 0.18
RSS2386 A07 22144609 6e-84
RSS2406 A07 7796331 1e-109
RSS2408 A07 13613204 3e-74
RSS2449 A07 13616450 1e-08
RSS2473 A07 17343148 1e-35
RSS2479 A07 15237622 4e-69
RSS2490 A07 14927458 1e-93
RSS2496 A07 12108665 4e-83
RSS2526 A07 15446037 3e-32
RSS2527 A07 3023863 2e-85
RSS2535 A07 20848358 1e-100
RSS2536 A07 8858057 1e-114
RSS2549 A07 7351035 2e-62
RSS2569 A07 10453998 3e-93
RSS2574 A07 15151766 1e-155
RSS2582 A07 16667604 1e-36
RSS2593 A07 20869349 2e-06 LG1 65.5
RSS2597 A07 12073032 9e-85
RSS2598 A07 4281468 8e-96
RSS2600 A07 13140246 7e-78
RSS2628 A07 10009929 1e-108
RSS2641 A07 20848338 2e-84
RSS2644 A07 8143770 1e-104
RSS2657 A07 1540555 1e-105 LG2 62.8
RSS2659 A07 20378639 4e-33
RSS2664 A07 22049597 1e-112
RSS2690 A07 13567642 2e-90
RSS2693 A07 21620122 8e-83
RSS2694 A07 12723999 1e-114
RSS2711 A07 16981485 8e-90
RSS2721 A07 13032261 0.036 LG5 27.7
RSS2739 A07 22041501 1e-20
RSS2750 A07 13794820 1e-133
RSS2755 A07 10612651 1e-121
RSS2767 A07 19169222 2e-95
RSS2768 A07 7032481 1e-14
RSS2787 A07 13643783 1e-121
RSS2791 A07 16131566 1e-108
RSS2801 A07 17427897 1e-109
RSS2803 A07 3826041 8e-74
RSS2810 A07 21464064 1e-104
RSS2816 A07 18363316 1e-116
RSS2819 A07 21851287 5e-82
RSS2821 A07 22206172 1e-116
RSS2825 A07 16192219 1e-133
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 362

MarkerDB | Raphanus sativus