Radish Marker Database

B. rapa genome (v1.2) list : A07

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 362


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS1710 A07 15000729 6e-33 LG4 57.6
RSS1721 A07 11723044 2e-07 LG1 21.2
RSS1759 A07 13963569 5e-77
RSS1761 A07 12009248 1e-92
RSS1765 A07 7079107 1e-116
RSS1771 A07 16625481 1e-134
RSS1781 A07 20388372 1e-118 LG1 66.9
RSS1785 A07 13734343 2e-63
RSS1787 A07 14633973 3e-90
RSS1789 A07 13517056 1e-117
RSS1794 A07 12587783 1e-68
RSS1795 A07 3263965 5e-72 LG3 130.0
RSS1810 A07 11404279 4e-37
RSS1826 A07 21351194 1e-117
RSS1833 A07 15656385 8e-99
RSS1877 A07 12590831 0.16
RSS1896 A07 21082508 3e-82 LG1 64.2
RSS1902 A07 12073599 6e-59 LG4 23.5
RSS1936 A07 15317627 1e-104
RSS1942 A07 19506940 4e-93
RSS1946 A07 5768795 1e-116
RSS1948 A07 22515437 1e-124
RSS1962 A07 5763852 1e-110
RSS1966 A07 17645053 1e-107
RSS1975 A07 15086952 8e-13
RSS1984 A07 11013816 2e-80
RSS1985 A07 11574792 1e-97
RSS1991 A07 13016127 2e-88
RSS1993 A07 20481638 1e-104
RSS2008 A07 3854563 1e-90 LG3 51.0
RSS2017 A07 16561777 1e-24
RSS2060 A07 21107913 2e-46
RSS2065 A07 9596168 7e-96
RSS2079 A07 17063201 2e-48 LG4 64.2
RSS2088 A07 8220132 0.001
RSS2109 A07 9805642 1e-103
RSS2120 A07 18361164 2e-92
RSS2122 A07 11509901 4e-84
RSS2136 A07 13165362 1e-81
RSS2147 A07 10054088 6e-30 LG6 12.5
RSS2150 A07 9830007 2e-61
RSS2168 A07 22407440 5e-36 LG6 12.3
RSS2172 A07 11301141 2e-11
RSS2181 A07 16449851 2e-48
RSS2183 A07 20481206 2e-84
RSS2186 A07 9294578 4e-53
RSS2187 A07 21676148 1e-111
RSS2194 A07 5229328 3e-13
RSS2217 A07 1018815 1e-79 LG2 67.2
RSS2288 A07 7542204 3e-41
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 362

MarkerDB | Raphanus sativus