Radish Marker Database

B. rapa genome (v1.2) list : A07

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 362


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3963 A07 13491750 4e-51 LG1 32.0
RSS0313 A07 13493374 2e-65 LG1 32.0
RSS1371 A07 13502862 4e-90 LG1 32.7
RSS0797 A07 13502901 5e-86 LG1 32.0
RSS1789 A07 13517056 1e-117
RSS2690 A07 13567642 2e-90
RSS1368 A07 13607410 1e-71
RSS2408 A07 13613204 3e-74
RSS1129 A07 13615582 1e-106
RSS2449 A07 13616450 1e-08
RSS1303 A07 13639034 1e-88
RSS2787 A07 13643783 1e-121
RSS0580 A07 13653668 2e-97
RSS1124 A07 13700375 8e-67
RSS3262 A07 13700822 3e-62 LG1 31.4
RSS2325 A07 13700822 1e-100
RSS3922 A07 13702440 2e-91 LG1 31.4
RSS1785 A07 13734343 2e-63
RSS1270 A07 13740807 1e-124
RSS0401 A07 13769316 1e-104
RSS0466 A07 13793419 1e-108 LG1 31.2
RSS2750 A07 13794820 1e-133
RSS0449 A07 13810392 3e-47 LG1 31.3
RSS1759 A07 13963569 5e-77
RSS2313 A07 13964067 1e-105
RSS3239 A07 13969154 7e-91
RSS3626 A07 13993009 5e-90
RSS1022 A07 14230062 4e-84
RSS3846 A07 14293609 0.011
RSS3084 A07 14302856 2e-98
RSS3242 A07 14336123 8e-64
RSS4021 A07 14348716 0.034
RSS0793 A07 14576347 1e-102
RSS0052 A07 14579517 4e-34
RSS3058 A07 14598884 1e-103
RSS0194 A07 14630773 1e-71
RSS1787 A07 14633973 3e-90
RSS1665 A07 14650617 2e-73
RSS3585 A07 14650635 4e-89
RSS0267 A07 14668257 2e-93
RSS0792 A07 14761869 1e-103
RSS3615 A07 14839902 5e-95 LG1 66.1
RSS2490 A07 14927458 1e-93
RSS1030 A07 14954745 4e-55
RSS1710 A07 15000729 6e-33 LG4 57.6
RSS3364 A07 15028217 8e-84
RSS1975 A07 15086952 8e-13
RSS2574 A07 15151766 1e-155
RSS1630 A07 15179061 3e-70
RSS0028 A07 15237279 4e-71
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 362


MarkerDB | Raphanus sativus