Radish Marker Database

B. rapa genome (v1.2) list : A07

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 362


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS1172 A07 16247561 5e-84
RSS1176 A07 3263970 6e-89
RSS1177 A07 18471165 1e-57 LG6 20.8
RSS1182 A07 18511219 2e-98
RSS1189 A07 19752905 1e-113
RSS1206 A07 11899974 2e-91
RSS1214 A07 16880789 2e-33
RSS1241 A07 21108797 9e-64 LG1 63.8
RSS1253 A07 19223008 1e-119
RSS1270 A07 13740807 1e-124
RSS1277 A07 16979557 5e-82
RSS1284 A07 4344205 3e-17 LG4 60.4
RSS1302 A07 19319180 1e-83
RSS1303 A07 13639034 1e-88
RSS1316 A07 11251368 1e-99
RSS1324 A07 16977778 8e-89
RSS1327 A07 3264070 4e-73
RSS1354 A07 12491132 4e-71
RSS1356 A07 20851118 1e-128
RSS1357 A07 8326754 1e-115
RSS1362 A07 15323664 6e-74
RSS1368 A07 13607410 1e-71
RSS1369 A07 18270863 1e-52 LG6 19.4
RSS1370 A07 18993542 1e-89
RSS1371 A07 13502862 4e-90 LG1 32.7
RSS1403 A07 16790096 0.069
RSS1419 A07 21849499 4e-69
RSS1461 A07 20453351 1e-55
RSS1463 A07 7544507 5e-41
RSS1465 A07 19602659 1e-101
RSS1481 A07 18914160 1e-113
RSS1483 A07 19060992 1e-83
RSS1492 A07 11353338 6e-95
RSS1498 A07 17487517 1e-118
RSS1505 A07 9906849 1e-128
RSS1513 A07 19462904 2e-98 LG6 28.3
RSS1526 A07 8839829 4e-86
RSS1535 A07 19048936 1e-116
RSS1541 A07 9344428 5e-73
RSS1550 A07 6825878 9e-72
RSS1560 A07 20773769 5e-44
RSS1562 A07 16769628 2e-05
RSS1567 A07 4679651 3e-69
RSS1594 A07 11404538 4e-29
RSS1602 A07 17993089 6e-96
RSS1612 A07 12782479 1e-104
RSS1630 A07 15179061 3e-70
RSS1651 A07 10662316 8e-34
RSS1665 A07 14650617 2e-73
RSS1700 A07 491752 1e-68
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 362

MarkerDB | Raphanus sativus