Radish Marker Database

B. rapa genome (v1.2) list : A06

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 466


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3368 A06 8408270 1e-101
RSS3369 A06 15098113 1e-121
RSS3377 A06 3109672 1e-46
RSS3385 A06 25764476 1e-106
RSS3388 A06 15781760 1e-84
RSS3402 A06 6371586 1e-21 LG9 5.0
RSS3403 A06 296267 1e-103
RSS3407 A06 14660476 1e-98
RSS3408 A06 18594123 1e-112
RSS3443 A06 5635537 1e-108
RSS3447 A06 6716782 2e-82
RSS3448 A06 17547669 1e-66
RSS3464 A06 9955862 5e-99
RSS3465 A06 26042575 1e-42
RSS3476 A06 8603358 1e-108
RSS3483 A06 3504470 1e-112
RSS3516 A06 25665848 4e-75 LG4 77.1
RSS3528 A06 3919155 2e-75
RSS3534 A06 24248814 1e-108 LG2 56.4
RSS3547 A06 5920337 2e-76
RSS3553 A06 25666525 4e-99
RSS3572 A06 854478 1e-126
RSS3586 A06 1457746 1e-124
RSS3590 A06 2881970 2e-76
RSS3607 A06 9776858 4e-39
RSS3609 A06 20097609 5e-17
RSS3616 A06 25595422 2e-76 LG4 85.6
RSS3635 A06 14985851 4e-79 LG3 114.1
RSS3637 A06 21328661 2e-81 LG4 87.9
RSS3645 A06 14675075 6e-05
RSS3654 A06 3835094 1e-40
RSS3662 A06 24050375 1e-108
RSS3665 A06 10802749 5e-11
RSS3673 A06 10448431 1e-87
RSS3674 A06 2821368 2e-82
RSS3680 A06 18807314 9e-61
RSS3733 A06 7108150 6e-73
RSS3749 A06 1017550 4e-87
RSS3751 A06 6457735 3e-82
RSS3755 A06 5666279 2e-68
RSS3772 A06 22187312 2e-60 LG4 97.8
RSS3778 A06 5783486 9e-42 LG9 55.7
RSS3796 A06 14737176 2e-63
RSS3814 A06 18592038 7e-79
RSS3853 A06 12176580 1e-107
RSS3858 A06 8573866 8e-95
RSS3859 A06 9537273 1e-106
RSS3861 A06 2937807 3e-96
RSS3863 A06 22533586 2e-67 LG4 95.7
RSS3870 A06 24452250 9e-51 LG7 84.4
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 466


MarkerDB | Raphanus sativus