Radish Marker Database

B. rapa genome (v1.2) list : A06

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 466


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS2669 A06 23044019 1e-106
RSS1788 A06 23124996 1e-100
RSS2285 A06 23265917 5e-46 LG6 134.4
RSS2025 A06 23265920 2e-89
RSS2000 A06 23267540 4e-69
RSS2953 A06 23267652 8e-59
RSS2626 A06 23607525 3e-71 LG7 90.7
RSS3339 A06 23626937 4e-53
RSS1427 A06 23683710 5e-45 LG7 89.9
RSS2042 A06 23772430 1e-82
RSS2500 A06 23801273 6e-90
RSS0092 A06 23939802 2e-90 LG7 87.7
RSS0902 A06 23977313 2e-84
RSS1502 A06 23989343 4e-82
RSS3662 A06 24050375 1e-108
RSS3003 A06 24176019 1e-105 LG7 85.8
RSS0221 A06 24189945 1e-100
RSS2984 A06 24196106 5e-74
RSS1899 A06 24222022 1e-131 LG7 86.4
RSS3534 A06 24248814 1e-108 LG2 56.4
RSS0072 A06 24248814 4e-16
RSS2105 A06 24306772 3e-82
RSS1073 A06 24353240 1e-100
RSS2685 A06 24370883 5e-49
RSS2840 A06 24391708 5e-58
RSS1098 A06 24426746 3e-55
RSS3870 A06 24452250 9e-51 LG7 84.4
RSS0204 A06 24452545 1e-116
RSS2164 A06 24688104 1e-164
RSS3983 A06 24724095 8e-94
RSS2257 A06 24821275 1e-84
RSS0920 A06 24832578 3e-58
RSS2417 A06 24847686 1e-109
RSS0369 A06 25034000 5e-99 LG4 79.8
RSS1926 A06 25114074 2e-66
RSS2647 A06 25118305 4e-69
RSS2608 A06 25190284 5e-58
RSS1050 A06 25216570 6e-77
RSS1538 A06 25217530 1e-108
RSS2243 A06 25270964 4e-72
RSS2757 A06 25341412 1e-144
RSS2369 A06 25346112 1e-133
RSS1487 A06 25347069 1e-124
RSS2423 A06 25444327 8e-94
RSS1074 A06 25474112 1e-128
RSS3252 A06 25492166 1e-123
RSS0570 A06 25498029 4e-61
RSS0435 A06 25579589 1e-126
RSS1916 A06 25593717 2e-23
RSS3616 A06 25595422 2e-76 LG4 85.6
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 466


MarkerDB | Raphanus sativus