Radish Marker Database

B. rapa genome (v1.2) list : A06

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 466


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2984 A06 24196106 5e-74
RSS2998 A06 6753045 1e-95
RSS3003 A06 24176019 1e-105 LG7 85.8
RSS3011 A06 14184705 2e-56
RSS3014 A06 17123572 1e-124
RSS3031 A06 6198120 1e-110
RSS3040 A06 3088650 2e-61
RSS3050 A06 7774564 1e-116
RSS3056 A06 11840511 2e-73
RSS3073 A06 26203917 6e-77
RSS3075 A06 3605003 2e-78
RSS3078 A06 5584791 3e-54 LG7 19.3
RSS3079 A06 10852750 1e-88
RSS3085 A06 25946245 6e-86
RSS3089 A06 10208016 1e-146 LG3 74.3
RSS3090 A06 4007367 8e-49 LG9 61.1
RSS3100 A06 2060548 3e-73
RSS3117 A06 16309194 9e-74
RSS3123 A06 26097161 4e-42
RSS3131 A06 16104892 3e-62
RSS3143 A06 575717 1e-117
RSS3162 A06 4266292 1e-152
RSS3167 A06 22171079 1e-117
RSS3175 A06 15013678 8e-50
RSS3177 A06 893854 4e-83 LG3 108.5
RSS3181 A06 19425286 7e-39
RSS3182 A06 19182240 2e-65
RSS3194 A06 15947101 0.010
RSS3199 A06 18302917 2e-17
RSS3211 A06 18126800 3e-55
RSS3213 A06 19547274 1e-103
RSS3225 A06 8815869 2e-53
RSS3235 A06 6426421 1e-78
RSS3252 A06 25492166 1e-123
RSS3256 A06 20784318 1e-51
RSS3257 A06 12529456 2e-69
RSS3271 A06 12706395 3e-47
RSS3272 A06 21443494 6e-74
RSS3283 A06 4910769 3e-38
RSS3294 A06 995857 9e-91
RSS3295 A06 14184997 1e-105
RSS3310 A06 9991644 5e-43
RSS3316 A06 20508509 6e-56
RSS3318 A06 2573488 7e-95
RSS3336 A06 3837032 1e-110
RSS3338 A06 15752036 2e-52
RSS3339 A06 23626937 4e-53
RSS3344 A06 17174058 9e-55
RSS3349 A06 5784372 1e-130
RSS3365 A06 22470973 1e-114
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 466

MarkerDB | Raphanus sativus