Radish Marker Database

B. rapa genome (v1.2) list : A06

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 466


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS3213 A06 19547274 1e-103
RSS2922 A06 19555923 1e-83
RSS0255 A06 19556712 2e-46 LG3 126.4
RSS2848 A06 19563779 6e-66
RSS3609 A06 20097609 5e-17
RSS2290 A06 20217319 3e-98 LG3 58.8
RSS3316 A06 20508509 6e-56
RSS3256 A06 20784318 1e-51
RSS3908 A06 21046771 8e-04
RSS1460 A06 21066211 1e-92
RSS1681 A06 21159821 6e-83
RSS2162 A06 21205591 2e-91
RSS2456 A06 21233834 6e-72
RSS0648 A06 21276205 1e-103
RSS0201 A06 21288417 1e-92
RSS2027 A06 21328027 1e-59
RSS3637 A06 21328661 2e-81 LG4 87.9
RSS1994 A06 21343567 1e-108
RSS1237 A06 21442624 3e-89
RSS3272 A06 21443494 6e-74
RSS1864 A06 21612166 1e-129
RSS2899 A06 21653252 1e-82
RSS1850 A06 21809702 3e-69
RSS2705 A06 21853440 3e-34 LG4 98.4
RSS1127 A06 21860422 2e-86 LG4 98.1
RSS0521 A06 21866370 2e-65
RSS0126 A06 21906672 2e-99
RSS1005 A06 22106600 6e-73
RSS3167 A06 22171079 1e-117
RSS3772 A06 22187312 2e-60 LG4 97.8
RSS1774 A06 22197769 1e-24 LG3 110.8
RSS2019 A06 22321404 2e-51
RSS3365 A06 22470973 1e-114
RSS2061 A06 22474914 5e-78
RSS3863 A06 22533586 2e-67 LG4 95.7
RSS0372 A06 22583002 3e-63
RSS0839 A06 22583616 8e-83 LG4 96.1
RSS0839_a A06 22583616 8e-83 LG2 49.3
RSS0396 A06 22583958 1e-105 LG4 96.1
RSS1418 A06 22592583 6e-41 LG4 95.7
RSS0936 A06 22633332 2e-43 LG4 95.2
RSS0282 A06 22732769 3e-92
RSS0812 A06 22772593 2e-74
RSS0203 A06 22911957 2e-81
RSS0033 A06 22917306 3e-71 LG4 92.8
RSS0069 A06 22923961 9e-14
RSS2153 A06 22948884 1e-97
RSS2766 A06 22950299 1e-103
RSS2327 A06 22963463 1e-113
RSS0760 A06 22998086 3e-86 LG7 94.2
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 466

MarkerDB | Raphanus sativus