Radish Marker Database

B. rapa genome (v1.2) list : A06

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 466


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2500 A06 23801273 6e-90
RSS2512 A06 11493208 9e-63
RSS2523 A06 8792494 2e-82
RSS2525 A06 577017 1e-108
RSS2546 A06 16090118 1e-109
RSS2551 A06 16024482 1e-115
RSS2558 A06 2857597 1e-105
RSS2575 A06 18138351 8e-65 LG6 122.5
RSS2581 A06 18129696 1e-23
RSS2592 A06 3092318 1e-124
RSS2601 A06 19218794 1e-117
RSS2603 A06 17974421 1e-110
RSS2608 A06 25190284 5e-58
RSS2626 A06 23607525 3e-71 LG7 90.7
RSS2629 A06 17726413 1e-126
RSS2647 A06 25118305 4e-69
RSS2668 A06 25610056 4e-72
RSS2669 A06 23044019 1e-106
RSS2685 A06 24370883 5e-49
RSS2699 A06 19274890 1e-100
RSS2702 A06 17272370 5e-34
RSS2705 A06 21853440 3e-34 LG4 98.4
RSS2707 A06 7554804 3e-41
RSS2710 A06 8043786 9e-89
RSS2714 A06 15486231 2e-33
RSS2719 A06 14710969 1e-103
RSS2736 A06 8795834 2e-99 LG9 45.8
RSS2757 A06 25341412 1e-144
RSS2765 A06 17545455 6e-46
RSS2766 A06 22950299 1e-103
RSS2770 A06 1920304 1e-23 LG3 53.8
RSS2777 A06 6023148 5e-75
RSS2788 A06 14672398 2e-67
RSS2798 A06 1660154 1e-133
RSS2837 A06 2274124 2e-59
RSS2840 A06 24391708 5e-58
RSS2842 A06 10966080 6e-74
RSS2844 A06 18624107 1e-100
RSS2848 A06 19563779 6e-66
RSS2873 A06 16639389 1e-49
RSS2882 A06 6786733 1e-21
RSS2894 A06 8793388 1e-85
RSS2899 A06 21653252 1e-82
RSS2909 A06 3163365 4e-71
RSS2922 A06 19555923 1e-83
RSS2950 A06 528165 2e-88
RSS2953 A06 23267652 8e-59
RSS2964 A06 15411287 1e-116
RSS2965 A06 10565965 1e-100
RSS2969 A06 9036716 4e-84
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 466

MarkerDB | Raphanus sativus