Radish Marker Database

B. rapa genome (v1.2) list : A06

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 466


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2132 A06 14768593 1e-51
RSS2153 A06 22948884 1e-97
RSS2156 A06 659471 3e-27
RSS2162 A06 21205591 2e-91
RSS2164 A06 24688104 1e-164
RSS2167 A06 2857597 1e-102 LG2 121.6
RSS2179 A06 14745796 4e-86 LG3 124.5
RSS2184 A06 10076114 6e-32
RSS2202 A06 16649556 2e-56 LG4 111.8
RSS2214 A06 7699241 2e-23
RSS2215 A06 16183340 1e-43
RSS2216 A06 17162818 4e-99
RSS2218 A06 16687895 1e-115
RSS2226 A06 3504503 7e-90
RSS2232 A06 15439794 1e-28
RSS2243 A06 25270964 4e-72
RSS2251 A06 4696660 1e-106
RSS2252 A06 18775055 1e-92
RSS2255 A06 7586371 9e-78
RSS2257 A06 24821275 1e-84
RSS2262 A06 8067132 1e-119
RSS2265 A06 6629792 6e-91
RSS2285 A06 23265917 5e-46 LG6 134.4
RSS2289 A06 11891642 1e-36 LG3 129.3
RSS2290 A06 20217319 3e-98 LG3 58.8
RSS2316 A06 11094148 7e-94 LG5 38.6
RSS2319 A06 19326120 0.092
RSS2320 A06 17727751 1e-130 LG4 107.7
RSS2327 A06 22963463 1e-113
RSS2328 A06 2229278 7e-64
RSS2343 A06 14260857 1e-83
RSS2354 A06 505655 7e-71
RSS2369 A06 25346112 1e-133
RSS2378 A06 6029926 1e-118 LG7 19.6
RSS2383 A06 504827 2e-24
RSS2390 A06 4244815 1e-113
RSS2411 A06 16345155 1e-109
RSS2417 A06 24847686 1e-109
RSS2420 A06 1126850 1e-100
RSS2421 A06 5664175 7e-85
RSS2423 A06 25444327 8e-94
RSS2424 A06 2121939 8e-29
RSS2426 A06 5239933 1e-107
RSS2428 A06 14574016 3e-46 LG3 125.2
RSS2429 A06 10448431 1e-122
RSS2434 A06 6870284 1e-55 LG7 22.2
RSS2455 A06 10092150 4e-49 LG5 39.7
RSS2456 A06 21233834 6e-72
RSS2459 A06 19275634 5e-39 LG3 127.6
RSS2494 A06 6370048 2e-30 LG9 5.0
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 466

MarkerDB | Raphanus sativus