Radish Marker Database

B. rapa genome (v1.2) list : A06

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 466


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS0616 A06 10127286 1e-103
RSS3673 A06 10448431 1e-87
RSS2429 A06 10448431 1e-122
RSS0827 A06 10448468 1e-91
RSS0272 A06 10509826 1e-93
RSS2965 A06 10565965 1e-100
RSS1519 A06 10566613 1e-101
RSS4007 A06 10661172 1e-111
RSS3665 A06 10802749 5e-11
RSS3079 A06 10852750 1e-88
RSS2842 A06 10966080 6e-74
RSS0165 A06 11025259 6e-98
RSS0836 A06 11051920 1e-132
RSS0643 A06 11395304 1e-120
RSS0216 A06 11484103 1e-133
RSS2512 A06 11493208 9e-63
RSS0474 A06 11840139 2e-92
RSS3056 A06 11840511 2e-73
RSS3853 A06 12176580 1e-107
RSS0174 A06 12375626 7e-47
RSS3257 A06 12529456 2e-69
RSS3271 A06 12706395 3e-47
RSS1659 A06 12707647 4e-72
RSS1476 A06 13164292 1e-95
RSS1989 A06 13257538 1e-133
RSS0906 A06 13616237 6e-74
RSS0323 A06 14082197 2e-21
RSS3011 A06 14184705 2e-56
RSS3295 A06 14184997 1e-105
RSS2343 A06 14260857 1e-83
RSS0497 A06 14411628 2e-70
RSS0803 A06 14521048 1e-118
RSS1969 A06 14531713 1e-81
RSS1229 A06 14573100 6e-90
RSS0752 A06 14646119 7e-56
RSS1068 A06 14649039 1e-112
RSS3407 A06 14660476 1e-98
RSS2788 A06 14672398 2e-67
RSS3645 A06 14675075 6e-05
RSS2719 A06 14710969 1e-103
RSS3796 A06 14737176 2e-63
RSS1933 A06 14755848 1e-19
RSS1233 A06 14760325 1e-110
RSS2132 A06 14768593 1e-51
RSS1830 A06 14998169 2e-43
RSS3175 A06 15013678 8e-50
RSS3369 A06 15098113 1e-121
RSS1390 A06 15142634 1e-103
RSS1888 A06 15256235 1e-69
RSS2964 A06 15411287 1e-116
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 466

MarkerDB | Raphanus sativus