Radish Marker Database

B. rapa genome (v1.2) list : A06

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 466


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS1233 A06 14760325 1e-110
RSS2132 A06 14768593 1e-51
RSS1445 A06 14776412 6e-81 LG3 124.3
RSS3635 A06 14985851 4e-79 LG3 114.1
RSS1830 A06 14998169 2e-43
RSS3175 A06 15013678 8e-50
RSS0020 A06 15017142 1e-64 LG3 123.8
RSS3369 A06 15098113 1e-121
RSS1390 A06 15142634 1e-103
RSS1888 A06 15256235 1e-69
RSS2964 A06 15411287 1e-116
RSS2232 A06 15439794 1e-28
RSS3898 A06 15439986 2e-53
RSS2714 A06 15486231 2e-33
RSS1213 A06 15488813 3e-75
RSS1372 A06 15559246 1e-123
RSS1569 A06 15744898 2e-54
RSS3338 A06 15752036 2e-52
RSS1783 A06 15753098 2e-28
RSS1639 A06 15778606 1e-102
RSS3388 A06 15781760 1e-84
RSS3194 A06 15947101 0.010
RSS2551 A06 16024482 1e-115
RSS2546 A06 16090118 1e-109
RSS3131 A06 16104892 3e-62
RSS2215 A06 16183340 1e-43
RSS3117 A06 16309194 9e-74
RSS2411 A06 16345155 1e-109
RSS0125 A06 16402259 2e-98 LG3 116.1
RSS0399 A06 16408783 1e-131
RSS0392 A06 16430995 1e-126
RSS1554 A06 16460029 7e-82
RSS0067 A06 16470148 6e-81 LG4 110.9
RSS0254 A06 16617031 8e-98 LG2 42.2
RSS2873 A06 16639389 1e-49
RSS2202 A06 16649556 2e-56 LG4 111.8
RSS2218 A06 16687895 1e-115
RSS3954 A06 16849590 5e-44
RSS0120 A06 17105989 1e-106
RSS3014 A06 17123572 1e-124
RSS2216 A06 17162818 4e-99
RSS0766 A06 17162818 1e-82
RSS3344 A06 17174058 9e-55
RSS0010 A06 17199007 2e-46
RSS2702 A06 17272370 5e-34
RSS1636 A06 17345705 7e-70 LG4 109.6
RSS1703 A06 17363630 1e-74
RSS0608 A06 17399397 1e-122
RSS1953 A06 17400726 4e-71
RSS1431 A06 17531196 3e-70
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 466

MarkerDB | Raphanus sativus