Radish Marker Database

B. rapa genome (v1.2) list : A06

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 466


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS1778 A06 3810121 5e-28
RSS1783 A06 15753098 2e-28
RSS1788 A06 23124996 1e-100
RSS1808 A06 9121711 6e-15
RSS1811 A06 8092771 3e-54 LG9 47.4
RSS1830 A06 14998169 2e-43
RSS1850 A06 21809702 3e-69
RSS1860 A06 402773 1e-103
RSS1864 A06 21612166 1e-129
RSS1867 A06 6221115 2e-78
RSS1888 A06 15256235 1e-69
RSS1899 A06 24222022 1e-131 LG7 86.4
RSS1913 A06 9915807 2e-75
RSS1916 A06 25593717 2e-23
RSS1926 A06 25114074 2e-66
RSS1929 A06 804043 6e-13
RSS1933 A06 14755848 1e-19
RSS1950 A06 9025161 2e-56
RSS1952 A06 8837744 4e-32
RSS1953 A06 17400726 4e-71
RSS1961 A06 7600028 1e-47
RSS1964 A06 2990684 1e-60
RSS1969 A06 14531713 1e-81
RSS1989 A06 13257538 1e-133
RSS1990 A06 7841158 1e-120
RSS1994 A06 21343567 1e-108
RSS1995 A06 18878466 4e-16 LG9 15.5
RSS1996 A06 9772883 5e-40
RSS2000 A06 23267540 4e-69
RSS2005 A06 2891530 1e-101
RSS2007 A06 19262870 1e-122
RSS2009 A06 18872533 6e-96
RSS2013 A06 26045473 3e-87
RSS2019 A06 22321404 2e-51
RSS2025 A06 23265920 2e-89
RSS2027 A06 21328027 1e-59
RSS2038 A06 7692935 2e-38
RSS2042 A06 23772430 1e-82
RSS2047 A06 5117305 2e-91 LG9 56.5
RSS2061 A06 22474914 5e-78
RSS2078 A06 11734929 7e-79 LG2 40.8
RSS2078_a A06 11734929 7e-79 LG3 128.2
RSS2082 A06 18901644 1e-82
RSS2091 A06 4529100 8e-83
RSS2097 A06 8330409 4e-85
RSS2101 A06 19175249 1e-86
RSS2105 A06 24306772 3e-82
RSS2110 A06 17564569 6e-78
RSS2127 A06 4937270 7e-94
RSS2131 A06 9588041 6e-43
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 466


MarkerDB | Raphanus sativus