Radish Marker Database

B. rapa genome (v1.2) list : A06

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 466


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS1276 A06 10764669 2e-43 LG2 92.6
RSS3665 A06 10802749 5e-11
RSS3079 A06 10852750 1e-88
RSS2842 A06 10966080 6e-74
RSS0165 A06 11025259 6e-98
RSS0836 A06 11051920 1e-132
RSS2316 A06 11094148 7e-94 LG5 38.6
RSS0643 A06 11395304 1e-120
RSS0216 A06 11484103 1e-133
RSS2512 A06 11493208 9e-63
RSS2078_a A06 11734929 7e-79 LG3 128.2
RSS2078 A06 11734929 7e-79 LG2 40.8
RSS0474 A06 11840139 2e-92
RSS3056 A06 11840511 2e-73
RSS0310 A06 11889907 1e-51 LG3 129.1
RSS2289 A06 11891642 1e-36 LG3 129.3
RSS3853 A06 12176580 1e-107
RSS1381 A06 12330350 1e-46 LG3 49.2
RSS0174 A06 12375626 7e-47
RSS3257 A06 12529456 2e-69
RSS1066 A06 12614635 1e-94 LG2 90.8
RSS3271 A06 12706395 3e-47
RSS1659 A06 12707647 4e-72
RSS1006_a A06 13034123 1e-58 LG6 8.5
RSS1476 A06 13164292 1e-95
RSS1989 A06 13257538 1e-133
RSS1246 A06 13597158 4e-41 LG3 75.5
RSS0906 A06 13616237 6e-74
RSS0295 A06 13616237 2e-67 LG3 76.3
RSS1104 A06 13691045 8e-74 LG2 94.8
RSS0323 A06 14082197 2e-21
RSS3011 A06 14184705 2e-56
RSS3295 A06 14184997 1e-105
RSS2343 A06 14260857 1e-83
RSS0640 A06 14319151 8e-46 LG3 122.8
RSS0497 A06 14411628 2e-70
RSS0803 A06 14521048 1e-118
RSS1969 A06 14531713 1e-81
RSS1229 A06 14573100 6e-90
RSS2428 A06 14574016 3e-46 LG3 125.2
RSS1293 A06 14577560 2e-82 LG3 125.2
RSS0752 A06 14646119 7e-56
RSS1068 A06 14649039 1e-112
RSS3407 A06 14660476 1e-98
RSS2788 A06 14672398 2e-67
RSS3645 A06 14675075 6e-05
RSS2719 A06 14710969 1e-103
RSS3796 A06 14737176 2e-63
RSS2179 A06 14745796 4e-86 LG3 124.5
RSS1933 A06 14755848 1e-19
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 466

MarkerDB | Raphanus sativus