Radish Marker Database

B. rapa genome (v1.2) list : A06

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 466


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS1229 A06 14573100 6e-90
RSS1233 A06 14760325 1e-110
RSS1237 A06 21442624 3e-89
RSS1246 A06 13597158 4e-41 LG3 75.5
RSS1254 A06 8843228 1e-37
RSS1276 A06 10764669 2e-43 LG2 92.6
RSS1293 A06 14577560 2e-82 LG3 125.2
RSS1346 A06 7560333 1e-108
RSS1364 A06 6979218 2e-17
RSS1372 A06 15559246 1e-123
RSS1375 A06 18253686 7e-35
RSS1381 A06 12330350 1e-46 LG3 49.2
RSS1390 A06 15142634 1e-103
RSS1397 A06 6609658 6e-21
RSS1398 A06 6942308 3e-42
RSS1413 A06 18612305 7e-52
RSS1418 A06 22592583 6e-41 LG4 95.7
RSS1427 A06 23683710 5e-45 LG7 89.9
RSS1431 A06 17531196 3e-70
RSS1432 A06 3863226 1e-82
RSS1440 A06 9177285 9e-39
RSS1445 A06 14776412 6e-81 LG3 124.3
RSS1460 A06 21066211 1e-92
RSS1468 A06 8929499 3e-98
RSS1476 A06 13164292 1e-95
RSS1487 A06 25347069 1e-124
RSS1502 A06 23989343 4e-82
RSS1519 A06 10566613 1e-101
RSS1538 A06 25217530 1e-108
RSS1546 A06 4368641 1e-122
RSS1554 A06 16460029 7e-82
RSS1568 A06 1917649 1e-115
RSS1569 A06 15744898 2e-54
RSS1578 A06 18872028 1e-112
RSS1636 A06 17345705 7e-70 LG4 109.6
RSS1637 A06 19458957 5e-78
RSS1639 A06 15778606 1e-102
RSS1644 A06 3766807 2e-44
RSS1648 A06 1329616 2e-61
RSS1659 A06 12707647 4e-72
RSS1664 A06 17687792 5e-18
RSS1681 A06 21159821 6e-83
RSS1691 A06 18472882 1e-61
RSS1698 A06 9497698 2e-62
RSS1703 A06 17363630 1e-74
RSS1705 A06 501356 3e-76
RSS1729 A06 3315350 1e-49
RSS1753 A06 8843228 1e-64
RSS1766 A06 5126088 1e-107
RSS1774 A06 22197769 1e-24 LG3 110.8
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 466

MarkerDB | Raphanus sativus