Radish Marker Database

B. rapa genome (v1.2) list : A06

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 466


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS0831 A06 9136279 1e-114
RSS0836 A06 11051920 1e-132
RSS0839 A06 22583616 8e-83 LG4 96.1
RSS0839_a A06 22583616 8e-83 LG2 49.3
RSS0843 A06 1606608 1e-133
RSS0850 A06 1532069 2e-80
RSS0853 A06 26241668 1e-117
RSS0876 A06 4065322 1e-116
RSS0883 A06 25849900 1e-125
RSS0885 A06 9632037 6e-63
RSS0890 A06 6719954 3e-61
RSS0902 A06 23977313 2e-84
RSS0906 A06 13616237 6e-74
RSS0907 A06 7664103 2e-75
RSS0913 A06 25758869 2e-86 LG9 21.9
RSS0920 A06 24832578 3e-58
RSS0925 A06 365228 3e-73 LG9 5.8
RSS0933 A06 26207615 1e-101
RSS0936 A06 22633332 2e-43 LG4 95.2
RSS0938 A06 5692720 1e-119 LG9 56.1
RSS0946 A06 5125236 3e-82
RSS0947 A06 8965812 4e-35
RSS0950 A06 684824 2e-94
RSS0954 A06 667841 9e-99
RSS0981 A06 4384801 3e-86
RSS0982 A06 1904524 1e-120
RSS1001 A06 17589862 1e-111
RSS1005 A06 22106600 6e-73
RSS1006_a A06 13034123 1e-58 LG6 8.5
RSS1023 A06 2575661 1e-120
RSS1050 A06 25216570 6e-77
RSS1051 A06 1752668 4e-89
RSS1062 A06 18061330 1e-97
RSS1066 A06 12614635 1e-94 LG2 90.8
RSS1068 A06 14649039 1e-112
RSS1073 A06 24353240 1e-100
RSS1074 A06 25474112 1e-128
RSS1086 A06 18902115 7e-96
RSS1093 A06 2963497 5e-70
RSS1098 A06 24426746 3e-55
RSS1104 A06 13691045 8e-74 LG2 94.8
RSS1121 A06 1329658 4e-52
RSS1127 A06 21860422 2e-86 LG4 98.1
RSS1139 A06 18117842 4e-31
RSS1155 A06 18899402 2e-68 LG3 127.4
RSS1158 A06 17629086 1e-105
RSS1198 A06 1044856 2e-35
RSS1213 A06 15488813 3e-75
RSS1223 A06 6152796 1e-133
RSS1226 A06 4507513 1e-139
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 466

MarkerDB | Raphanus sativus